Phormidium sp. OSCR

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Oscillatoriales

Family

Oscillatoriaceae

Genus

Phormidium

Description

Phormidium sp. OSCR is characterized by having a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The organism is cataloged under the accession number LJZT00000000.1, which provides a reference for further genetic and taxonomic studies. As a member of the cyanobacterial group, Phormidium species are typically recognized for their filamentous morphology and ability to thrive in various aquatic environments. These cyanobacteria play a crucial role in their ecosystems, contributing to primary production and nitrogen fixation. While specific ecological roles of Phormidium sp. OSCR are not detailed, related species are known to contribute to the formation of biofilms and serve as a food source for various microorganisms and larger organisms within their habitats. The presence of a single replicon in Phormidium sp. OSCR may suggest an evolutionary advantage in specific environments, potentially reflecting adaptations to fluctuating conditions in aquatic ecosystems. Understanding the genomic features and ecological roles of such organisms is essential for comprehending their contributions to biodiversity and ecosystem functioning. In summary, Phormidium sp. OSCR, with its unique genetic structure and ecological potential, exemplifies the importance of cyanobacteria in aquatic ecosystems, warranting further exploration of its ecological impacts and functional roles.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderOscillatoriales
FamilyOscillatoriaceae
GenusPhormidium
SpeciesPhormidium sp. OSCR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Phormidium sp. OSCR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phormidium sp. OSCR ITZY_scaf_2165, whole genome shotgun

Gene Summary

Adenine Count

1153725 bp

Thymine Count

1142765 bp

Guanine Count

1189205 bp

Cytosine Count

1209007 bp

Genome Length

4694862 bp

Protein-coding Genes

4158 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal transduction histidine kinaseHLUCCO16_00555Not AvailablePositive122585 - 125980128140.0
putative response regulatorHLUCCO16_00560Not AvailablePositive126013 - 12640214806.1
putative protein containing caspase domainHLUCCO16_00565Not AvailablePositive126453 - 12797657427.0
hypothetical proteinHLUCCO16_00570Not AvailableNegative128087 - 1283268986.93
hypothetical proteinHLUCCO16_00575Not AvailableNegative128416 - 1286468781.49
atp-grasp domainHLUCCO16_00580Not AvailablePositive129225 - 13084761532.2
aspartyl-trna synthetase aspsHLUCCO16_00585Not AvailableNegative131008 - 13280167654.6
ribosomal rna small subunit methyltransferase aHLUCCO16_00590Not AvailableNegative133191 - 13400930226.9
putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily)HLUCCO16_00595Not AvailablePositive134161 - 13502432560.0
glycosyltransferases involved in cell wall biogenesisHLUCCO16_00600Not AvailableNegative135295 - 13623036215.9

Displaying genes 121 – 130 of 4211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.