Rhodanobacter sp. SCN 66-43

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter sp. SCN 66-43 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, which is indicative of its genetic structure and stability. The complete genomic information for Rhodanobacter sp. SCN 66-43 is available under the accession MEGK00000000.1. The classification of Rhodanobacter sp. places it within a group of microorganisms known for their diverse metabolic capabilities, particularly in soil environments. While specific metabolic pathways and ecological roles of Rhodanobacter sp. SCN 66-43 are not detailed in the supplied traits, members of the Rhodanobacter genus are often associated with biogeochemical cycling processes, such as nitrogen and sulfur transformations. This bacterium's Gram-negative nature suggests that it possesses an outer membrane, which may provide advantages in terms of resistance to certain environmental stresses and antibiotics. Such traits are relevant for survival in various ecological niches. The single replicon indicates a streamlined genetic organization, which could facilitate efficient replication and adaptation to changing environments. Overall, Rhodanobacter sp. SCN 66-43 is positioned within a broader ecological context where its interactions with soil components and other microorganisms may contribute to essential nutrient cycling and soil health. Understanding the specific functions of this bacterium could provide insights into its role in maintaining ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter sp. SCN 66-43
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Rhodanobacter sp. SCN 66-43 ABT18_C0028, whole genome shotgun

Gene Summary

Adenine Count

610574 bp

Thymine Count

600532 bp

Guanine Count

1154304 bp

Cytosine Count

1174851 bp

Genome Length

3540356 bp

Protein-coding Genes

3038 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinABT18_12770Not AvailablePositive2863522 - 286384511971.9
branched-chain alpha-keto acid dehydrogenase subunit e2ABT18_12775Not AvailableNegative2863954 - 286533347608.9
cupinABT18_12780Not AvailableNegative2865365 - 286573013792.4
2-oxoisovalerate dehydrogenaseABT18_12785Not AvailableNegative2865746 - 286672635309.5
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaABT18_12790Not AvailableNegative2866938 - 286802340067.6
tryptophan 2,3-dioxygenaseABT18_12795Not AvailablePositive2868579 - 286943332784.4
hypothetical proteinABT18_12800Not AvailablePositive2869585 - 287107854446.4
dihydroorotate dehydrogenaseABT18_12805Not AvailablePositive2871099 - 287261055230.3
marr family transcriptional regulatorABT18_12810Not AvailableNegative2872742 - 287323318438.3
4-hydroxyphenylpyruvate dioxygenaseABT18_12815Not AvailablePositive2873388 - 287447640433.4

Displaying genes 2471 – 2480 of 3038 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.