Pelagibacterium sp. SCN 63-126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Devosiaceae

Genus

Pelagibacterium

Description

Pelagibacterium sp. SCN 63-126 is characterized by having a single replicon, which is a notable trait for this bacterium. The organism is cataloged under the accession MEET00000000.1, indicating its identification within a specific database for microbial genomes. The unique genetic structure of possessing only one replicon may suggest a streamlined genomic organization, which is often associated with efficiency in metabolic processes and adaptation to specific ecological niches. Pelagibacterium species, as a group, are known for their role in marine ecosystems, particularly in the cycling of organic matter. They are typically abundant in oceanic waters and contribute to the degradation of organic compounds. This trait emphasizes their ecological importance in nutrient cycling and energy flow within marine environments. The limited genomic complexity, characterized by a single replicon, may confer advantages in specific habitats, allowing Pelagibacterium sp. SCN 63-126 to thrive in environments where resources are limited. This efficiency in genetic organization is often linked to a successful survival strategy in fluctuating marine ecosystems. Overall, the traits of Pelagibacterium sp. SCN 63-126 underline its potential role in marine biogeochemical cycles, highlighting the significance of microbial life in maintaining ecological balance in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyDevosiaceae
GenusPelagibacterium
SpeciesPelagibacterium sp. SCN 63-126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibacterium sp. SCN 63-126 ABS74_C0016, whole genome

Gene Summary

Adenine Count

760080 bp

Thymine Count

747299 bp

Guanine Count

1262139 bp

Cytosine Count

1273539 bp

Genome Length

4043057 bp

Protein-coding Genes

3759 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinABS74_00735Not AvailablePositive145548 - 14669942848.4
putrescine abc transporter permease pothABS74_00740Not AvailablePositive146863 - 14781334909.1
putrescine abc transporter permease potiABS74_00745Not AvailablePositive147815 - 14862729217.6
formyltetrahydrofolate deformylaseABS74_00750Not AvailablePositive148981 - 14983531497.1
rrf2 family transcriptional regulatorABS74_00755Not AvailableNegative149864 - 15030116238.9
hypothetical proteinABS74_00760Not AvailableNegative150327 - 15281986249.7
septation protein aABS74_00765Not AvailableNegative152995 - 15362123288.1
signal recognition particle-docking protein ftsyABS74_00770Not AvailableNegative153835 - 15505243255.9
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabABS74_00775Not AvailableNegative155088 - 15635045538.2
diaminopimelate epimeraseABS74_00780Not AvailableNegative156350 - 15719830675.4

Displaying genes 221 – 230 of 3854 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.