Agrobacterium sp. SCN 61-19

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium sp. SCN 61-19 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This organism possesses a single replicon, indicating a streamlined genetic structure that may influence its replication and stability in various environments. The accession number for this strain is MEDN00000000.1, which serves as a unique identifier for its genomic data. The Gram-negative classification of Agrobacterium sp. SCN 61-19 suggests that it has a thin peptidoglycan layer situated between two membranes, which may contribute to its adaptability and survival in diverse ecological niches. The presence of flagella is particularly noteworthy, as it implies that the bacterium can move toward favorable conditions or away from harmful stimuli, enhancing its ability to thrive in competitive environments. From an ecological perspective, Agrobacterium species are known for their role in plant interactions, particularly in the context of plant pathogenicity and genetic engineering. While specific pathogenic traits of SCN 61-19 are not detailed in the provided traits, the genus Agrobacterium is renowned for its ability to transfer DNA to plants, which could have implications for agricultural practices and biotechnological applications. Understanding the motility and genetic characteristics of Agrobacterium sp. SCN 61-19 can provide insights into its ecological roles and potential uses in research and industry.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp. SCN 61-19
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium sp. SCN 61-19
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Agrobacterium sp. SCN 61-19 ABS40_C0047, whole genome shotgun

Gene Summary

Adenine Count

865972 bp

Thymine Count

861850 bp

Guanine Count

1374164 bp

Cytosine Count

1373030 bp

Genome Length

4475018 bp

Protein-coding Genes

4190 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinABS40_21385Not AvailableNegative4450947 - 445227247220.7
hypothetical proteinABS40_21390Not AvailableNegative4452269 - 445305727765.4
hypothetical proteinABS40_21395Not AvailableNegative4453054 - 445400233717.0
hypothetical proteinABS40_21400Not AvailableNegative4454057 - 445494732400.9
hypothetical proteinABS40_21405Not AvailableNegative4455090 - 445638846965.0
5-oxoprolinaseABS40_21410Not AvailableNegative4456448 - 445833768866.8
hypothetical proteinABS40_21415Not AvailableNegative4458358 - 445970148333.0
exopolysaccharide biosynthesis proteinABS40_21420Not AvailableNegative4460025 - 446063020817.5
hypothetical proteinABS40_21425Not AvailableNegative4461254 - 446310170987.4
crp/fnr family transcriptional regulatorABS40_21430Not AvailablePositive4463385 - 446408325934.5

Displaying genes 4221 – 4230 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.