Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260 is a bacterial strain characterized by a single replicon, which may suggest a streamlined genomic organization conducive to its ecological niche. The strain is cataloged under the accession number NZ_CP012546.1, indicating its sequence data is available for further study. As a member of the Campylobacter genus, this subspecies is typically associated with marine mammals, particularly pinnipeds such as seals and sea lions. The adaptation to this specific host group may reflect evolutionary processes that allow for survival and reproduction in marine environments. This association may also have implications for understanding the transmission dynamics of Campylobacter species in aquatic ecosystems and their potential impact on both wildlife and human health. The genomic data from strain RM17260 can provide insights into the genetic basis for its pathogenicity, metabolic capabilities, and environmental resilience. Understanding these traits is essential for evaluating its role within the marine microbiome and its interactions with host organisms. Additionally, studying this strain can contribute to broader knowledge about the Campylobacter genus, including its diversity and ecological roles in different environments. Overall, the characterization of Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260 underscores the importance of microbial diversity in ecological systems and highlights the need for continued research into marine-associated bacteria.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter pinnipediorum
Strainsubsp. pinnipediorum RM17260

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter pinnipediorum subsp. pinnipediorum strain RM17260

Gene Summary

Adenine Count

625398 bp

Thymine Count

615020 bp

Guanine Count

272862 bp

Cytosine Count

269385 bp

Genome Length

1782665 bp

Protein-coding Genes

1751 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylaminoimidazolesuccinocarboxamide synthaseCPIN17260_RS04025Not AvailablePositive786928 - 78763827037.6
phosphoribosylformylglycinamidine synthase subunit pursCPIN17260_RS04030Not AvailablePositive787647 - 7878838564.45
phosphoribosylformylglycinamidine synthase subunit purqCPIN17260_RS04035Not AvailablePositive787880 - 78854524643.9
sh3 domain-containing proteinCPIN17260_RS04040Not AvailablePositive788539 - 78981049492.6
lysophospholipid acyltransferase family proteinCPIN17260_RS04045Not AvailablePositive789791 - 79046826077.6
fluoride efflux transporter crcbCPIN17260_RS04050Not AvailablePositive790458 - 79082013524.3
hypothetical proteinCPIN17260_RS04055Not AvailableNegative791052 - 79160321433.6
heavy metal translocating p-type atpaseCPIN17260_RS04060Not AvailableNegative791613 - 79376979091.4
heavy-metal-associated domain-containing proteinCPIN17260_RS04065Not AvailableNegative793771 - 7939777651.98
gnat family n-acetyltransferaseCPIN17260_RS04070Not AvailableNegative793974 - 79452221830.1

Displaying genes 851 – 860 of 1851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.