Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260 is a bacterial strain characterized by a single replicon, which may suggest a streamlined genomic organization conducive to its ecological niche. The strain is cataloged under the accession number NZ_CP012546.1, indicating its sequence data is available for further study. As a member of the Campylobacter genus, this subspecies is typically associated with marine mammals, particularly pinnipeds such as seals and sea lions. The adaptation to this specific host group may reflect evolutionary processes that allow for survival and reproduction in marine environments. This association may also have implications for understanding the transmission dynamics of Campylobacter species in aquatic ecosystems and their potential impact on both wildlife and human health. The genomic data from strain RM17260 can provide insights into the genetic basis for its pathogenicity, metabolic capabilities, and environmental resilience. Understanding these traits is essential for evaluating its role within the marine microbiome and its interactions with host organisms. Additionally, studying this strain can contribute to broader knowledge about the Campylobacter genus, including its diversity and ecological roles in different environments. Overall, the characterization of Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260 underscores the importance of microbial diversity in ecological systems and highlights the need for continued research into marine-associated bacteria.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter pinnipediorum
Strainsubsp. pinnipediorum RM17260

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter pinnipediorum subsp. pinnipediorum str. RM17260
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter pinnipediorum subsp. pinnipediorum strain RM17260

Gene Summary

Adenine Count

625398 bp

Thymine Count

615020 bp

Guanine Count

272862 bp

Cytosine Count

269385 bp

Genome Length

1782665 bp

Protein-coding Genes

1751 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdate abc transporter permease subunitCPIN17260_RS07370Not AvailableNegative1414494 - 141517125361.5
dna-directed rna polymerase subunit beta'CPIN17260_RS07375Not AvailableNegative1415269 - 1419777167033.0
dna-directed rna polymerase subunit betaCPIN17260_RS07380Not AvailableNegative1419770 - 1423909155707.0
50s ribosomal protein l7/l12CPIN17260_RS07385Not AvailableNegative1424022 - 142439312945.5
50s ribosomal protein l10CPIN17260_RS07390Not AvailableNegative1424412 - 142489718109.0
50s ribosomal protein l1CPIN17260_RS07395Not AvailableNegative1424997 - 142569824862.2
50s ribosomal protein l11CPIN17260_RS07400Not AvailableNegative1425764 - 142618915136.7
transcription termination/antitermination protein nusgCPIN17260_RS07405Not AvailableNegative1426201 - 142673120108.3
preprotein translocase subunit seceCPIN17260_RS07410Not AvailableNegative1426743 - 14269226658.57
Trna-trpNot AvailableNot AvailablePositive1426939 - 1427014Not Available

Displaying genes 1511 – 1520 of 1851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.