Peptococcaceae bacterium 1109

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Peptococcaceae

Genus

Description

Peptococcaceae bacterium 1109 is a member of the Peptococcaceae family, characterized by having a single replicon. The organism's genomic information is cataloged under the accession number LDJB00000000.1. Peptococcaceae are known to be anaerobic, gram-positive bacteria that typically inhabit various environments, including soil and the gastrointestinal tracts of animals. While specific ecological roles of Peptococcaceae bacterium 1109 remain unspecified, members of this family often contribute to the breakdown of complex organic materials and play a role in nutrient cycling within their environments. Understanding the traits of Peptococcaceae bacterium 1109 may provide insights into its potential applications in bioremediation or agriculture, particularly in processes that involve anaerobic digestion or the enhancement of soil health. Its single replicon indicates a streamlined genomic structure, which may reflect adaptations to specific ecological niches or metabolic pathways. The study of this bacterium and its relatives can enhance our knowledge of microbial diversity and their functions in ecosystems, particularly in anaerobic environments where they fulfill critical roles in decomposition and nutrient recycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Peptococcaceae bacterium 1109 scaffold00012, whole genome

Gene Summary

Adenine Count

601655 bp

Thymine Count

607636 bp

Guanine Count

707354 bp

Cytosine Count

734350 bp

Genome Length

2701748 bp

Protein-coding Genes

2294 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l17AA931_07100Q2RFS7Negative1448510 - 144880611046.6
dna-directed rna polymerase subunit alphaAA931_07105Q2RFS6Negative1448864 - 144980535148.3
30s ribosomal protein s11AA931_07110Q2RFS4Negative1449884 - 145028214394.5
30s ribosomal protein s13AA931_07115Q0AUK6Negative1450307 - 145067213993.3
50s ribosomal protein l36AA931_07120Q65P82Negative1450698 - 14508114361.7
translation initiation factor if-1AA931_07125O50630Negative1450839 - 14510578262.2
hypothetical proteinAA931_07130Not AvailableNegative1451044 - 145133110390.2
methionine aminopeptidaseAA931_07135P19994Negative1451336 - 145209127326.5
adenylate kinaseAA931_07140O29581Negative1452088 - 145277424754.5
preprotein translocase subunit secyAA931_07145P0A5Z3Negative1452792 - 145406045683.3

Displaying genes 1301 – 1310 of 2346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

112 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm0000701aldehydo-D-apioseC5H10O5Chemical structure of aldehydo-D-apioseNot available
Average150.13Da
Monoisotopic150.052823422Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da

Displaying 1–10 of 112 metabolites

Health Effects

No health effects information available for this bacterium.