Polaribacter sp. BACL8 MAG-120531-bin13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter sp. BACL8 MAG-120531-bin13 is categorized as a Gram-negative, rod-shaped bacterium. This organism is notable for having a single replicon, which suggests a streamlined genetic organization typical of some microbial taxa. The genomic data for this species is accessible under the accession number LICK00000000.1, providing a basis for further studies on its genetic makeup and potential applications. The Gram-negative classification of Polaribacter sp. BACL8 indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane, characteristic of this group. This structural feature can influence its interactions with the environment, including its susceptibility to antibiotics and its ability to form biofilms. Ecologically, members of the Polaribacter genus are often found in polar and subpolar regions, where they play significant roles in biogeochemical cycles, particularly in the degradation of organic matter in cold environments. The adaptation of Polaribacter sp. BACL8 to its ecological niche may involve unique metabolic pathways that enable it to thrive in low-temperature conditions, contributing to nutrient cycling in these ecosystems. In summary, Polaribacter sp. BACL8 MAG-120531-bin13 exemplifies a Gram-negative, rod-shaped bacterium with a single replicon and potential ecological importance in polar environments. Its genomic data provides a foundation for understanding its metabolic capabilities and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter sp. BACL8 MAG-120531-bin13
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter sp. BACL8 MAG-120531-bin13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter sp. BACL8 MAG-120531-bin13


Gene Summary

Adenine Count

643939 bp

Thymine Count

643117 bp

Guanine Count

401340 bp

Cytosine Count

398135 bp

Genome Length

2086531 bp

Protein-coding Genes

1775 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase subunit sigma-70ABR91_03610Q3IYV6Negative8756 - 928320133.4
udp-n-acetylenolpyruvoylglucosamine reductaseABR91_03615A5FNG4Negative9293 - 1030937773.5
aspartate aminotransferaseABR91_03620P53001Negative10309 - 1149943060.0
hypothetical proteinABR91_03625Not AvailableNegative11557 - 1193713705.9
valine--trna ligaseABR91_03630A0M5I5Positive12071 - 14707100453.0
sterol desaturaseABR91_03635Q5M8F9Positive14738 - 1600948818.8
acyl-coa-binding proteinABR91_03640Not AvailableNegative16046 - 163009325.26
phosphatidylserine decarboxylaseABR91_03645Q11Y69Negative16293 - 1695824613.2
phosphatidate cytidylyltransferaseABR91_03650O31752Negative16961 - 1775529513.4
lactate utilization protein b/cABR91_03655Not AvailableNegative17756 - 1836422861.3

Displaying genes 11 – 20 of 1807 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

118 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 118 metabolites

Health Effects

No health effects information available for this bacterium.