Arthrobacter sp. YC-RL1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter sp. YC-RL1 is a bacterial strain characterized by the presence of flagella, which suggests motility capabilities that may play a role in its ecological interactions. This strain contains a single replicon, indicating a streamlined genomic structure that may contribute to efficient replication and adaptation within its environment. The genetic information of Arthrobacter sp. YC-RL1 is cataloged under the accession number LCYH00000000.1, providing a reference for further studies and comparisons with other strains. The presence of flagella may enhance its ability to colonize various niches, as motility is often crucial for bacteria in seeking nutrients or avoiding adverse conditions. In an ecological context, the traits of Arthrobacter sp. YC-RL1 suggest its potential role in nutrient cycling and soil health, as members of the Arthrobacter genus are often involved in the degradation of complex organic compounds. The single replicon feature may indicate a specialized adaptation, allowing this strain to thrive in specific environments where resource efficiency is essential. Overall, the traits of Arthrobacter sp. YC-RL1 highlight its possible contributions to microbial communities and the ecological processes they support.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter sp. YC-RL1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter sp. YC-RL1


Gene Summary

Adenine Count

722817 bp

Thymine Count

724113 bp

Guanine Count

1283843 bp

Cytosine Count

1289754 bp

Genome Length

4037349 bp

Protein-coding Genes

3426 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
antitoxin hicbAA310_00125Not AvailableNegative26952 - 271617497.99
restriction endonuclease bgciAA310_00135Q07605Negative28222 - 3022574575.4
hypothetical proteinAA310_00140Not AvailableNegative30352 - 3069613846.3
hypothetical proteinAA310_00145Not AvailableNegative30710 - 3109613559.8
hypothetical proteinAA310_00150Not AvailableNegative31151 - 3157915254.1
hypothetical proteinAA310_00155Not AvailableNegative31582 - 3199214357.0
cobalamin biosynthesis protein cobqAA310_00160P37522Negative31995 - 3279527876.2
single-stranded dna-binding proteinAA310_00165Not AvailableNegative32882 - 3324713489.8
hypothetical proteinAA310_00170Not AvailableNegative33294 - 335339213.32
hypothetical proteinAA310_00175Not AvailableNegative33583 - 3401115741.6

Displaying genes 61 – 70 of 3524 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

277 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00004573,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneC19H24O4Chemical structure of 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dioneNot available
Average316.3915Da
Monoisotopic316.1674593Da

Displaying 1–10 of 277 metabolites

Health Effects

No health effects information available for this bacterium.