Corynebacterium crudilactis str. JZ16

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium crudilactis str. JZ16 is characterized by its unique genetic structure, comprising three replicons. The sequence data for this strain is available under the accession numbers NZ_CP015622.1, NZ_CP015623.1, and NZ_CP015624.1, which are essential for researchers looking to explore its genomic characteristics in detail. As a member of the Corynebacterium genus, C. crudilactis is part of a diverse group of bacteria known for their varied ecological roles and associations with hosts. The presence of three replicons suggests a potential for complex regulatory mechanisms and a rich genetic repertoire, which may contribute to its adaptability in various environments. This could be particularly relevant in contexts such as dairy fermentation processes, where corynebacteria often play significant roles. From an ecological perspective, the ability of C. crudilactis str. JZ16 to thrive in specific niches may offer insights into microbial interactions within those environments, particularly in relation to its metabolic capabilities. Understanding its genomic features can aid in elucidating its function in ecological contexts, such as its role in dairy products or other fermented foods, where it may influence flavor and preservation. Further research into its genetic makeup could reveal more about its ecological significance and potential applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium crudilactis
StrainJZ16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium crudilactis str. JZ16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium crudilactis str. JZ16


Gene Summary

Adenine Count

737448 bp

Thymine Count

737797 bp

Guanine Count

784977 bp

Cytosine Count

787149 bp

Genome Length

3047373 bp

Protein-coding Genes

2725 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaccrud_RS00005Q8NUD8Positive1 - 156058178.8
dna polymerase iii subunit betaccrud_RS00015A0QND6Positive2241 - 342542462.7
dna replication/repair protein recfccrud_RS00020Q6M8X7Positive3532 - 471643062.5
duf721 domain-containing proteinccrud_RS00025A4Q9S3Positive4713 - 524920060.5
dna topoisomerase (atp-hydrolyzing) subunit bccrud_RS00030A5TY73Positive5382 - 743675937.8
alpha/beta fold hydrolaseccrud_RS00035Not AvailablePositive7563 - 843831686.6
yitt family proteinccrud_RS00040Not AvailableNegative8435 - 901621251.8
duf6918 family proteinccrud_RS00045Not AvailableNegative9112 - 955215491.3
rok family transcriptional regulatorccrud_RS00050Not AvailableNegative9769 - 1083638818.1
tetr family transcriptional regulatorccrud_RS00055Not AvailableNegative10914 - 111779214.11

Displaying genes 1 – 10 of 2967 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

233 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 233 metabolites

Health Effects

No health effects information available for this bacterium.