Janthinobacterium sp. KBS0711

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Janthinobacterium sp. KBS0711 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. It has a single replicon, indicating a straightforward genomic structure that may facilitate genetic studies or biotechnological applications. The strain is cataloged under the accession number LBCO00000000.1, which serves as a reference for researchers seeking to access its genomic data. The presence of flagella in Janthinobacterium sp. KBS0711 is particularly noteworthy, as it may play a crucial role in the organism's ability to navigate its environment, potentially influencing its interactions with other microorganisms and its ecological niche. The motility conferred by flagella can enhance the bacterium's ability to colonize various surfaces, which is important in diverse habitats. In summary, Janthinobacterium sp. KBS0711 exhibits key traits such as being Gram-negative, having flagella, and possessing a single replicon. These characteristics underline its potential significance in microbial ecology, particularly in understanding the dynamics of motility and colonization in its native environment. Further research into this strain could provide insights into its ecological roles and applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium sp. KBS0711
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium sp. KBS0711 VM94_contig000036, whole genome

Gene Summary

Adenine Count

1133633 bp

Thymine Count

1128876 bp

Guanine Count

1899008 bp

Cytosine Count

1906240 bp

Genome Length

6072573 bp

Protein-coding Genes

5358 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
valine--trna ligaseVM94_02107A6SUQ8Positive2335798 - 2338605104702.0
hypothetical proteinVM94_02108Not AvailablePositive2338770 - 233921616108.6
bacterial ig-like domain (group 2)VM94_02109Q086E4Positive2339495 - 234180774219.7
outer membrane protein a precursorVM94_02110Not AvailablePositive2341821 - 234296040590.1
hypothetical proteinVM94_02111A4G1V0Negative2343013 - 234350417846.5
holliday junction atp-dependent dna helicase ruvbVM94_02112A4G1U9Negative2343504 - 234455938434.4
holliday junction atp-dependent dna helicase ruvaVM94_02113A4G1U8Negative2344566 - 234514419992.6
crossover junction endodeoxyribonuclease ruvcVM94_02114A6SUQ2Negative2345199 - 234573818643.0
bifunctional purine biosynthesis protein purhVM94_02115A6SUQ1Negative2345923 - 234750956374.6
dna-binding protein fisVM94_02116Q8Y231Negative2347615 - 23478488745.52

Displaying genes 2111 – 2120 of 5463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

289 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 289 metabolites

Health Effects

No health effects information available for this bacterium.