Calidithermus roseus str. NBRC 110900

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Calidithermus

Description

Calidithermus roseus strain NBRC 110900 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number QWLA00000000.1, which serves as a reference for genomic data and facilitates further research into its genetic makeup and functional capabilities. While specific phenotypic traits and ecological roles of Calidithermus roseus are not detailed in the provided data, the singular replicon suggests that this organism may possess unique metabolic pathways or ecological strategies that differ from those of more complex organisms with multiple replicons. Such characteristics can be advantageous for survival in niche habitats, particularly in extreme environments where many members of the genus Calidithermus are typically found. Understanding the genomic structure and potential metabolic capacities of Calidithermus roseus strain NBRC 110900 may provide insights into its ecological roles, particularly in thermophilic or oligotrophic conditions. Further studies could elucidate its contributions to microbial community dynamics and its potential applications in biotechnology or bioremediation. Overall, the streamlined genomic architecture of this strain positions it as a subject of interest for microbiological and ecological research.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusCalidithermus
SpeciesCalidithermus roseus
StrainNBRC 110900

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calidithermus roseus strain NBRC 110900 contig_184, whole genome

Gene Summary

Adenine Count

626723 bp

Thymine Count

630061 bp

Guanine Count

1212353 bp

Cytosine Count

1206340 bp

Genome Length

3675477 bp

Protein-coding Genes

3550 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 3,4-dioxygenase beta chainMrose_03187Not AvailablePositive3223825 - 322440021797.7
protocatechuate 3,4-dioxygenase alpha chainMrose_03188Not AvailablePositive3224400 - 322495120402.1
3-carboxy-cis,cis-muconate cycloisomeraseMrose_03189Not AvailablePositive3224963 - 322630648281.4
putative succinyl-coa:3-ketoacid coenzyme a transferase subunit bMrose_03190Not AvailablePositive3226400 - 322774346464.4
putative abc transporter atp-binding proteinMrose_03191Not AvailableNegative3228168 - 322997665993.5
atm1-type heavy metal exporterMrose_03192Not AvailableNegative3231139 - 323281862180.0
type 2 lantibiotic biosynthesis protein lanmMrose_03193Not AvailableNegative3232919 - 323363527942.3
type 2 lantibiotic biosynthesis protein lanmMrose_03194Not AvailableNegative3233613 - 323453335297.2
hypothetical proteinMrose_03195Not AvailableNegative3235201 - 323624139236.8
hypothetical proteinMrose_03196Not AvailableNegative3236353 - 32364543945.16

Displaying genes 3191 – 3200 of 3610 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.