Calidithermus roseus str. NBRC 110900

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Calidithermus

Description

Calidithermus roseus strain NBRC 110900 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number QWLA00000000.1, which serves as a reference for genomic data and facilitates further research into its genetic makeup and functional capabilities. While specific phenotypic traits and ecological roles of Calidithermus roseus are not detailed in the provided data, the singular replicon suggests that this organism may possess unique metabolic pathways or ecological strategies that differ from those of more complex organisms with multiple replicons. Such characteristics can be advantageous for survival in niche habitats, particularly in extreme environments where many members of the genus Calidithermus are typically found. Understanding the genomic structure and potential metabolic capacities of Calidithermus roseus strain NBRC 110900 may provide insights into its ecological roles, particularly in thermophilic or oligotrophic conditions. Further studies could elucidate its contributions to microbial community dynamics and its potential applications in biotechnology or bioremediation. Overall, the streamlined genomic architecture of this strain positions it as a subject of interest for microbiological and ecological research.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusCalidithermus
SpeciesCalidithermus roseus
StrainNBRC 110900

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calidithermus roseus strain NBRC 110900 contig_184, whole genome

Gene Summary

Adenine Count

626723 bp

Thymine Count

630061 bp

Guanine Count

1212353 bp

Cytosine Count

1206340 bp

Genome Length

3675477 bp

Protein-coding Genes

3550 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenosylcobinamide amidohydrolaseMrose_01817Not AvailableNegative1855092 - 185571821708.1
cob(i)yrinic acid a,c-diamide adenosyltransferaseMrose_01818Not AvailableNegative1855730 - 185630821341.7
hypothetical proteinMrose_01819Not AvailableNegative1856308 - 185663712153.9
ferric enterobactin transport atp-binding protein fepcMrose_01820Not AvailableNegative1856641 - 185743228616.9
hemin transport system permease protein hmuuMrose_01821Not AvailableNegative1857425 - 185848036088.5
vitamin b12-binding proteinMrose_01822Not AvailableNegative1858493 - 185935931480.6
Trna-leuNot AvailableNot AvailablePositive1859762 - 1859848Not Available
rna-splicing ligase rtcbMrose_01824Not AvailablePositive1860087 - 186130744143.7
hypothetical proteinMrose_01825Not AvailableNegative1861321 - 186174915807.6
trna threonylcarbamoyladenosine biosynthesis protein tsaeMrose_01826Not AvailablePositive1861841 - 186228416329.5

Displaying genes 1821 – 1830 of 3610 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.