Calidithermus roseus str. NBRC 110900

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Calidithermus

Description

Calidithermus roseus strain NBRC 110900 is characterized by having a single replicon, indicating a streamlined genomic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number QWLA00000000.1, which serves as a reference for genomic data and facilitates further research into its genetic makeup and functional capabilities. While specific phenotypic traits and ecological roles of Calidithermus roseus are not detailed in the provided data, the singular replicon suggests that this organism may possess unique metabolic pathways or ecological strategies that differ from those of more complex organisms with multiple replicons. Such characteristics can be advantageous for survival in niche habitats, particularly in extreme environments where many members of the genus Calidithermus are typically found. Understanding the genomic structure and potential metabolic capacities of Calidithermus roseus strain NBRC 110900 may provide insights into its ecological roles, particularly in thermophilic or oligotrophic conditions. Further studies could elucidate its contributions to microbial community dynamics and its potential applications in biotechnology or bioremediation. Overall, the streamlined genomic architecture of this strain positions it as a subject of interest for microbiological and ecological research.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderThermales
FamilyThermaceae
GenusCalidithermus
SpeciesCalidithermus roseus
StrainNBRC 110900

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Calidithermus roseus strain NBRC 110900 contig_184, whole genome

Gene Summary

Adenine Count

626723 bp

Thymine Count

630061 bp

Guanine Count

1212353 bp

Cytosine Count

1206340 bp

Genome Length

3675477 bp

Protein-coding Genes

3550 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-glucuronidaseMrose_01318Not AvailableNegative1373227 - 137505069623.1
helix-turn-helix domain proteinMrose_01319Not AvailablePositive1375253 - 137621535627.6
l-arabinose transport system permease protein araqMrose_01320Not AvailableNegative1376323 - 137716530471.2
lactose transport system permease protein lacfMrose_01321Not AvailableNegative1377162 - 137803131944.8
alpha-xylosidaseMrose_01322Not AvailableNegative1378033 - 138037285958.9
putative arabinose-binding proteinMrose_01323Not AvailableNegative1380427 - 138164445708.6
n-acetylglucosamine repressorMrose_01324Not AvailableNegative1381663 - 138284442199.1
replication initiator protein aMrose_01325Not AvailableNegative1383109 - 138451252434.5
dna ligaseMrose_01326Not AvailablePositive1384701 - 138601147972.1
Trna-proNot AvailableNot AvailablePositive1386171 - 1386247Not Available

Displaying genes 1331 – 1340 of 3610 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.