candidate division NC10 bacterium CSP1-5

Kingdom

Phylum

Methylomirabilota (SeqCode)

Class

Order

Family

Genus

Description

Candidate division NC10 bacterium CSP1-5 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and maintenance of its genetic material. The accession number for this bacterium is LDXR00000000.1, which serves as a reference for genetic and genomic analyses. The NC10 division has garnered interest due to its potential ecological roles, particularly in biogeochemical cycles. Members of this group are often involved in processes such as the degradation of organic matter and the cycling of carbon and nitrogen, which are critical for ecosystem functioning. Their unique metabolic pathways may allow them to thrive in specific environmental niches, contributing to the overall biodiversity and resilience of microbial communities. Understanding the traits of CSP1-5, particularly its single replicon structure, could provide insights into the evolutionary adaptations of NC10 bacteria. This feature may confer advantages in specific habitats where resource availability fluctuates, allowing these bacteria to respond rapidly to environmental changes. By studying such candidate divisions, researchers can gain a deeper understanding of microbial diversity and its implications for ecosystem health and sustainability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: candidate division NC10 bacterium CSP1-5 XU15_C0040, whole

Gene Summary

Adenine Count

518700 bp

Thymine Count

522013 bp

Guanine Count

871884 bp

Cytosine Count

854843 bp

Genome Length

2767502 bp

Protein-coding Genes

2837 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type 4 fimbrial assembly protein pilcXU15_C0005G0028Not AvailableNegative898650 - 89986443642.7
transporterXU15_C0005G0029Not AvailableNegative899868 - 90099841481.2
type iv pilus assembly protein tapbXU15_C0005G0030Not AvailableNegative901122 - 90282562152.7
shikimate dehydrogenaseXU15_C0005G0031Not AvailableNegative902898 - 90375830631.1
[protein-pii] uridylyltransferase (pii uridylyl-transferase), uridylyl-removing enzyme, utaseXU15_C0005G0032Not AvailableNegative903790 - 906600106073.0
hypothetical proteinXU15_C0005G0033Not AvailablePositive907063 - 90850854531.3
rex, redox-sensing transcriptional repressor rexXU15_C0005G0034Not AvailableNegative908524 - 90917723874.4
proton-translocating nadh-quinone oxidoreductase subunit n, nadh-quinone oxidoreductase subunit nXU15_C0005G0035Not AvailableNegative909191 - 91071452975.7
nadh-quinone oxidoreductase subunit l, nadh dehydrogenase i, chain l, ndh-1, chain lXU15_C0005G0036Not AvailableNegative910718 - 91262568496.0
nadh-quinone oxidoreductase subunit k, nadh dehydrogenase i, chain k, ndh-1, chain kXU15_C0005G0037Not AvailableNegative912715 - 91301710919.7

Displaying genes 881 – 890 of 2885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.