candidate division NC10 bacterium CSP1-5

Kingdom

Phylum

Methylomirabilota (SeqCode)

Class

Order

Family

Genus

Description

Candidate division NC10 bacterium CSP1-5 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and maintenance of its genetic material. The accession number for this bacterium is LDXR00000000.1, which serves as a reference for genetic and genomic analyses. The NC10 division has garnered interest due to its potential ecological roles, particularly in biogeochemical cycles. Members of this group are often involved in processes such as the degradation of organic matter and the cycling of carbon and nitrogen, which are critical for ecosystem functioning. Their unique metabolic pathways may allow them to thrive in specific environmental niches, contributing to the overall biodiversity and resilience of microbial communities. Understanding the traits of CSP1-5, particularly its single replicon structure, could provide insights into the evolutionary adaptations of NC10 bacteria. This feature may confer advantages in specific habitats where resource availability fluctuates, allowing these bacteria to respond rapidly to environmental changes. By studying such candidate divisions, researchers can gain a deeper understanding of microbial diversity and its implications for ecosystem health and sustainability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: candidate division NC10 bacterium CSP1-5 XU15_C0040, whole

Gene Summary

Adenine Count

518700 bp

Thymine Count

522013 bp

Guanine Count

871884 bp

Cytosine Count

854843 bp

Genome Length

2767502 bp

Protein-coding Genes

2837 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinXU15_C0023G0022Not AvailableNegative2526386 - 252761843424.3
transporter subunit: atp-binding component of abc superfamilyXU15_C0023G0023Not AvailableNegative2527615 - 252832825789.1
periplasmic component of efflux system, hlyd family secretion proteinXU15_C0023G0024Not AvailableNegative2528343 - 252957244014.8
hypothetical proteinXU15_C0023G0025Not AvailableNegative2529621 - 253000714787.7
hypothetical proteinXU15_C0023G0026Not AvailableNegative2530004 - 253045916178.7
rna polymerase sigma-h factor (sigma-30)XU15_C0023G0027Not AvailableNegative2530456 - 253106422846.5
his kinase a (phosphoacceptor) domain proteinXU15_C0023G0028Not AvailableNegative2531234 - 253333975960.9
Tmrna,resume consensus sequence (at 86): cacaactgccaacgctgaNot AvailableNot AvailablePositive2533647 - 2533999Not Available
trans-translation protein, binds tmrna and trna (ssra-binding protein)XU15_C0023G0029Not AvailableNegative2534098 - 253455917438.2
hypothetical proteinXU15_C0023G0030Not AvailableNegative2534595 - 253555436539.4

Displaying genes 2651 – 2660 of 2885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.