candidate division NC10 bacterium CSP1-5

Kingdom

Phylum

Methylomirabilota (SeqCode)

Class

Order

Family

Genus

Description

Candidate division NC10 bacterium CSP1-5 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and maintenance of its genetic material. The accession number for this bacterium is LDXR00000000.1, which serves as a reference for genetic and genomic analyses. The NC10 division has garnered interest due to its potential ecological roles, particularly in biogeochemical cycles. Members of this group are often involved in processes such as the degradation of organic matter and the cycling of carbon and nitrogen, which are critical for ecosystem functioning. Their unique metabolic pathways may allow them to thrive in specific environmental niches, contributing to the overall biodiversity and resilience of microbial communities. Understanding the traits of CSP1-5, particularly its single replicon structure, could provide insights into the evolutionary adaptations of NC10 bacteria. This feature may confer advantages in specific habitats where resource availability fluctuates, allowing these bacteria to respond rapidly to environmental changes. By studying such candidate divisions, researchers can gain a deeper understanding of microbial diversity and its implications for ecosystem health and sustainability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: candidate division NC10 bacterium CSP1-5 XU15_C0040, whole

Gene Summary

Adenine Count

518700 bp

Thymine Count

522013 bp

Guanine Count

871884 bp

Cytosine Count

854843 bp

Genome Length

2767502 bp

Protein-coding Genes

2837 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen decarboxylase, uroporphyrinogen decarboxylaseXU15_C0021G0039Not AvailablePositive2466000 - 246698636248.1
abc transporterXU15_C0022G0001Not AvailablePositive2466999 - 246750618859.4
protein gltb1, glutamate/aspartate transport system substrate-binding proteinXU15_C0022G0002Not AvailablePositive2467527 - 246839931790.6
protein gltj1, glutamate/aspartate transport system permease proteinXU15_C0022G0003Not AvailablePositive2468407 - 246914727148.6
protein gltk1, glutamate/aspartate transport system permease proteinXU15_C0022G0004Not AvailablePositive2469144 - 246983925960.7
type i phosphodiesterase/nucleotide pyrophosphataseXU15_C0022G0005Not AvailablePositive2469846 - 247072432295.2
hypothetical proteinXU15_C0022G0006Not AvailablePositive2471070 - 247147714550.8
hypothetical proteinXU15_C0022G0007Not AvailablePositive2471594 - 24717766904.69
hypothetical proteinXU15_C0022G0008Not AvailablePositive2471777 - 24719355814.11
phosphatidylethanolamine n-methyltransferaseXU15_C0022G0009Not AvailablePositive2472178 - 247286426014.2

Displaying genes 2581 – 2590 of 2885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.