candidate division NC10 bacterium CSP1-5

Kingdom

Phylum

Methylomirabilota (SeqCode)

Class

Order

Family

Genus

Description

Candidate division NC10 bacterium CSP1-5 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and maintenance of its genetic material. The accession number for this bacterium is LDXR00000000.1, which serves as a reference for genetic and genomic analyses. The NC10 division has garnered interest due to its potential ecological roles, particularly in biogeochemical cycles. Members of this group are often involved in processes such as the degradation of organic matter and the cycling of carbon and nitrogen, which are critical for ecosystem functioning. Their unique metabolic pathways may allow them to thrive in specific environmental niches, contributing to the overall biodiversity and resilience of microbial communities. Understanding the traits of CSP1-5, particularly its single replicon structure, could provide insights into the evolutionary adaptations of NC10 bacteria. This feature may confer advantages in specific habitats where resource availability fluctuates, allowing these bacteria to respond rapidly to environmental changes. By studying such candidate divisions, researchers can gain a deeper understanding of microbial diversity and its implications for ecosystem health and sustainability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: candidate division NC10 bacterium CSP1-5 XU15_C0040, whole

Gene Summary

Adenine Count

518700 bp

Thymine Count

522013 bp

Guanine Count

871884 bp

Cytosine Count

854843 bp

Genome Length

2767502 bp

Protein-coding Genes

2837 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peroxiredoxin (prx) family, ahpe-like protein subfamilyXU15_C0018G0022Not AvailableNegative2295682 - 229614616818.3
thiamine pyrophosphate domain-containing tpp-binding proteinXU15_C0018G0023Not AvailableNegative2296270 - 229728937461.1
2-oxoglutarate ferredoxin oxidoreductase subunit alphaXU15_C0018G0024Not AvailableNegative2297291 - 229915967874.0
nqo, nadh-quinone oxidoreductase subunit 6, nadh dehydrogenase i chain 6, ndh-1 subunit 6XU15_C0018G0025Not AvailableNegative2299215 - 229976320494.2
iron-binding protein isca (iron-sulfur cluster assembly protein)XU15_C0018G0026Not AvailableNegative2299804 - 230012411178.4
cysteine desulfurase (nitrogenase metalloclusters biosynthesis protein nifs)XU15_C0018G0027Not AvailableNegative2300163 - 230137743784.7
xaa-pro aminopeptidaseXU15_C0018G0028Not AvailableNegative2301476 - 230259440889.9
molybdenum cofactor biosynthesis protein a, molybdenum cofactor biosynthesis proteinXU15_C0018G0029Not AvailableNegative2302819 - 230387138796.8
nad, nadh-ubiquinone oxidoreductase 20 kda subunit (nadh dehydrogenase subunit 10)XU15_C0018G0030Not AvailableNegative2304009 - 230453018894.2
succinate-semialdehyde dehydrogenase, succinate-semialdehyde dehydrogenase (nadp+)XU15_C0018G0031Not AvailableNegative2304554 - 230599651470.1

Displaying genes 2401 – 2410 of 2885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.