candidate division NC10 bacterium CSP1-5

Kingdom

Phylum

Methylomirabilota (SeqCode)

Class

Order

Family

Genus

Description

Candidate division NC10 bacterium CSP1-5 is characterized by possessing a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and maintenance of its genetic material. The accession number for this bacterium is LDXR00000000.1, which serves as a reference for genetic and genomic analyses. The NC10 division has garnered interest due to its potential ecological roles, particularly in biogeochemical cycles. Members of this group are often involved in processes such as the degradation of organic matter and the cycling of carbon and nitrogen, which are critical for ecosystem functioning. Their unique metabolic pathways may allow them to thrive in specific environmental niches, contributing to the overall biodiversity and resilience of microbial communities. Understanding the traits of CSP1-5, particularly its single replicon structure, could provide insights into the evolutionary adaptations of NC10 bacteria. This feature may confer advantages in specific habitats where resource availability fluctuates, allowing these bacteria to respond rapidly to environmental changes. By studying such candidate divisions, researchers can gain a deeper understanding of microbial diversity and its implications for ecosystem health and sustainability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: candidate division NC10 bacterium CSP1-5 XU15_C0040, whole

Gene Summary

Adenine Count

518700 bp

Thymine Count

522013 bp

Guanine Count

871884 bp

Cytosine Count

854843 bp

Genome Length

2767502 bp

Protein-coding Genes

2837 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trehalose synthase, maltose alpha-d-glucosyltransferaseXU15_C0002G0065Not AvailablePositive143265 - 146627128342.0
4-alpha-glucanotransferase, 4-alpha-glucanotransferaseXU15_C0002G0066Not AvailablePositive146624 - 14901189920.2
1,4-alpha-glucan-branching protein, 1,4-alpha-glucan branching enzymeXU15_C0002G0067Not AvailablePositive149047 - 15100874723.0
alpha amylase catalytic subunitXU15_C0002G0068Not AvailablePositive151073 - 15307077289.3
glycosyl transferase group 1XU15_C0002G0069Not AvailablePositive153134 - 15435444753.2
Trna-aspNot AvailableNot AvailablePositive154543 - 154620Not Available
czca family heavy metal efflux protein, cu(i)/ag(i) efflux system membrane protein cusaXU15_C0002G0071Not AvailableNegative154639 - 157752114362.0
hypothetical proteinXU15_C0002G0072Not AvailableNegative157766 - 15934657024.8
outer membrane efflux proteinXU15_C0002G0073Not AvailableNegative159374 - 16066348320.2
hypothetical proteinXU15_C0002G0074Not AvailableNegative161334 - 16268350118.1

Displaying genes 131 – 140 of 2885 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.