Chloroflexi bacterium CSP1-4

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Order

Family

Genus

Description

Chloroflexi bacterium CSP1-4 is characterized by having a single replicon, which is a noteworthy trait as it indicates a streamlined genomic structure that could impact its replication and metabolic processes. The genomic data for this bacterium is cataloged under the accession number LDXM00000000.1, facilitating access to its sequence and further genomic analyses. The Chloroflexi phylum comprises diverse photosynthetic bacteria, known for their roles in various ecological processes, including carbon cycling and the degradation of organic materials. The specific implications of CSP1-4’s single replicon on its ecological niche remain to be fully explored, but such a genomic configuration may confer certain advantages in specific environments, such as efficiency in resource utilization or adaptation to fluctuating conditions. In summary, while CSP1-4's single replicon and corresponding genomic data provide essential insights into its genetic makeup, its ecological role within the Chloroflexi phylum highlights the potential for significant contributions to biogeochemical cycles, particularly in anaerobic or oligotrophic environments where these bacteria are often found. Understanding the specific ecological functions of CSP1-4 could enhance our knowledge of microbial community dynamics and the overall health of their ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Chloroflexi bacterium CSP1-4 XU10_C0065, whole genome shotgun

Gene Summary

Adenine Count

363663 bp

Thymine Count

364116 bp

Guanine Count

928800 bp

Cytosine Count

928632 bp

Genome Length

2585469 bp

Protein-coding Genes

2464 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
macrolide transporter atp-binding/permease proteinXU10_C0006G0064Not AvailablePositive816146 - 81699429919.0
mrr, 5-methylcytosine-specific restriction endonuclease, restriction system proteinXU10_C0006G0065P24202Negative817127 - 81813736827.1
Trna-argNot AvailableNot AvailablePositive818228 - 818303Not Available
hypothetical proteinXU10_C0006G0067Not AvailablePositive818374 - 81865510362.6
cytochrome c-type biogenesis protein ccda, cytochrome c-type biogenesis proteinXU10_C0006G0068Q9KDL8Positive818662 - 81940825638.4
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergenXU10_C0006G0069A4IQF5Positive819413 - 82006023003.8
zn-dependent hydrolase-like protein glyoxylaseXU10_C0006G0070Q08GP4Negative820057 - 82091730868.7
deoxycytidine triphosphate deaminase, dctp deaminaseXU10_C0006G0071A8LDU1Negative820936 - 82154122562.8
atp-cone domain-containing protein, transcriptional repressor nrdrXU10_C0006G0072B9L287Negative821550 - 82205918815.3
hypothetical proteinXU10_C0006G0073Not AvailableNegative822123 - 82267119667.9

Displaying genes 751 – 760 of 2502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

156 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 156 metabolites

Health Effects

No health effects information available for this bacterium.