Chloroflexi bacterium CSP1-4

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Order

Family

Genus

Description

Chloroflexi bacterium CSP1-4 is characterized by having a single replicon, which is a noteworthy trait as it indicates a streamlined genomic structure that could impact its replication and metabolic processes. The genomic data for this bacterium is cataloged under the accession number LDXM00000000.1, facilitating access to its sequence and further genomic analyses. The Chloroflexi phylum comprises diverse photosynthetic bacteria, known for their roles in various ecological processes, including carbon cycling and the degradation of organic materials. The specific implications of CSP1-4’s single replicon on its ecological niche remain to be fully explored, but such a genomic configuration may confer certain advantages in specific environments, such as efficiency in resource utilization or adaptation to fluctuating conditions. In summary, while CSP1-4's single replicon and corresponding genomic data provide essential insights into its genetic makeup, its ecological role within the Chloroflexi phylum highlights the potential for significant contributions to biogeochemical cycles, particularly in anaerobic or oligotrophic environments where these bacteria are often found. Understanding the specific ecological functions of CSP1-4 could enhance our knowledge of microbial community dynamics and the overall health of their ecosystems.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Chloroflexi bacterium CSP1-4 XU10_C0065, whole genome shotgun

Gene Summary

Adenine Count

363663 bp

Thymine Count

364116 bp

Guanine Count

928800 bp

Cytosine Count

928632 bp

Genome Length

2585469 bp

Protein-coding Genes

2464 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s19, small subunit ribosomal protein s19XU10_C0014G0077B1I1J2Negative1483918 - 148420210751.1
50s ribosomal protein l2, large subunit ribosomal protein l2XU10_C0014G0078A7NR60Negative1484222 - 148504930134.4
50s ribosomal protein l25, large subunit ribosomal protein l23XU10_C0014G0079Q3A9R8Negative1485051 - 148535311248.8
50s ribosomal protein l4, large subunit ribosomal protein l4XU10_C0014G0080Q3A9R7Negative1485350 - 148597322231.0
50s ribosomal protein l3, large subunit ribosomal protein l3XU10_C0014G0081B0KCK0Negative1485976 - 148659622083.7
30s ribosomal protein s10, small subunit ribosomal protein s10XU10_C0014G0082A7NR64Negative1486593 - 148690111653.3
tuf, elongation factor tu, elongation factor tuXU10_C0014G0083A1ALS6Negative1486905 - 148754022906.7
hypothetical proteinXU10_C0015G0001Not AvailableNegative1487541 - 148782010275.3
Trna-thrNot AvailableNot AvailablePositive1487912 - 1487986Not Available
multicopper oxidase type 3XU10_C0015G0003Not AvailableNegative1488211 - 148944043853.6

Displaying genes 1431 – 1440 of 2502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

156 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 156 metabolites

Health Effects

No health effects information available for this bacterium.