Thaumarchaeota archaeon CSP1-1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Order

Family

Genus

Description

Thaumarchaeota archaeon CSP1-1 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication processes. The genomic data for CSP1-1 is available under the accession number LDXL00000000.1. This information allows for the analysis of its genetic material and the identification of potential metabolic pathways and adaptations. Members of the Thaumarchaeota phylum are known for their roles in biogeochemical cycles, particularly in ammonia oxidation, which is a key process in nitrogen cycling in various ecosystems. The single-replicon structure of CSP1-1 may suggest a streamlined genomic organization, which is often associated with organisms adapted to specific ecological niches or environments. Understanding the traits of CSP1-1, particularly its genomic organization, can provide insights into its ecological role. Thaumarchaeota, including CSP1-1, are often found in extreme environments and contribute to the cycling of nutrients, thus playing a vital role in maintaining ecosystem health. The presence of a single replicon may enhance the efficiency of its metabolic processes, allowing it to thrive in its specific habitat. Overall, CSP1-1 exemplifies the adaptability and ecological significance of Thaumarchaeota in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Thaumarchaeota archaeon CSP1-1 XU09_C0010, whole genome

Gene Summary

Adenine Count

444586 bp

Thymine Count

446182 bp

Guanine Count

234660 bp

Cytosine Count

232913 bp

Genome Length

1358434 bp

Protein-coding Genes

1652 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermine synthaseXU09_C0001G0081Not AvailableNegative66828 - 6920986383.3
hypothetical proteinXU09_C0001G0082Not AvailableNegative69303 - 7008527906.1
repair helicase proteinXU09_C0001G0083Not AvailablePositive70198 - 7086025710.3
trna intron endonuclease, trna-intron endonuclease, archaea typeXU09_C0001G0084Not AvailableNegative70862 - 7143422187.8
50s ribosomal protein l16, large subunit ribosomal protein l10eXU09_C0001G0085Not AvailablePositive71553 - 7204718203.6
hypothetical proteinXU09_C0001G0086Not AvailableNegative72052 - 7234511576.9
Trna-glyNot AvailableNot AvailablePositive72406 - 72479Not Available
hypothetical proteinXU09_C0001G0088Not AvailableNegative72512 - 7302419056.7
sodium/hydrogen exchangerXU09_C0001G0089Not AvailableNegative73028 - 7435346547.5
uracil-dna glycosylaseXU09_C0001G0090Not AvailableNegative74632 - 7530325416.2

Displaying genes 81 – 90 of 1687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.