Thaumarchaeota archaeon CSP1-1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Order

Family

Genus

Description

Thaumarchaeota archaeon CSP1-1 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication processes. The genomic data for CSP1-1 is available under the accession number LDXL00000000.1. This information allows for the analysis of its genetic material and the identification of potential metabolic pathways and adaptations. Members of the Thaumarchaeota phylum are known for their roles in biogeochemical cycles, particularly in ammonia oxidation, which is a key process in nitrogen cycling in various ecosystems. The single-replicon structure of CSP1-1 may suggest a streamlined genomic organization, which is often associated with organisms adapted to specific ecological niches or environments. Understanding the traits of CSP1-1, particularly its genomic organization, can provide insights into its ecological role. Thaumarchaeota, including CSP1-1, are often found in extreme environments and contribute to the cycling of nutrients, thus playing a vital role in maintaining ecosystem health. The presence of a single replicon may enhance the efficiency of its metabolic processes, allowing it to thrive in its specific habitat. Overall, CSP1-1 exemplifies the adaptability and ecological significance of Thaumarchaeota in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Thaumarchaeota archaeon CSP1-1 XU09_C0010, whole genome

Gene Summary

Adenine Count

444586 bp

Thymine Count

446182 bp

Guanine Count

234660 bp

Cytosine Count

232913 bp

Genome Length

1358434 bp

Protein-coding Genes

1652 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold-shock dna-binding domain-containing protein, cold shock protein (beta-ribbon, cspa family)XU09_C0004G0216Not AvailablePositive483066 - 4832607034.08
translation initiation factor if-2, translation initiation factor 5bXU09_C0004G0217Not AvailableNegative483605 - 48538665867.6
nucleoside-diphosphate kinase, nucleoside-diphosphate kinaseXU09_C0004G0218Not AvailableNegative485393 - 48579414749.8
50s ribosomal protein l24XU09_C0004G0219Not AvailableNegative485796 - 4859997618.7
30s ribosomal protein s28eXU09_C0004G0220Not AvailableNegative486008 - 4862207821.81
rpl7ae, 50s ribosomal protein l7aeXU09_C0004G0221Not AvailableNegative486217 - 48660313510.3
phosphoglucosamine mutase, phosphomannomutase / phosphoglucomutaseXU09_C0004G0222Not AvailableNegative486636 - 48798548759.5
Trna-leuNot AvailableNot AvailablePositive488036 - 488123Not Available
formyl transferase domain-containing proteinXU09_C0004G0224Not AvailablePositive488162 - 48899831576.0
creatininaseXU09_C0004G0225Not AvailablePositive489004 - 48973527591.0

Displaying genes 591 – 600 of 1687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.