Thaumarchaeota archaeon CSP1-1

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Order

Family

Genus

Description

Thaumarchaeota archaeon CSP1-1 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication processes. The genomic data for CSP1-1 is available under the accession number LDXL00000000.1. This information allows for the analysis of its genetic material and the identification of potential metabolic pathways and adaptations. Members of the Thaumarchaeota phylum are known for their roles in biogeochemical cycles, particularly in ammonia oxidation, which is a key process in nitrogen cycling in various ecosystems. The single-replicon structure of CSP1-1 may suggest a streamlined genomic organization, which is often associated with organisms adapted to specific ecological niches or environments. Understanding the traits of CSP1-1, particularly its genomic organization, can provide insights into its ecological role. Thaumarchaeota, including CSP1-1, are often found in extreme environments and contribute to the cycling of nutrients, thus playing a vital role in maintaining ecosystem health. The presence of a single replicon may enhance the efficiency of its metabolic processes, allowing it to thrive in its specific habitat. Overall, CSP1-1 exemplifies the adaptability and ecological significance of Thaumarchaeota in various environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Thaumarchaeota archaeon CSP1-1 XU09_C0010, whole genome

Gene Summary

Adenine Count

444586 bp

Thymine Count

446182 bp

Guanine Count

234660 bp

Cytosine Count

232913 bp

Genome Length

1358434 bp

Protein-coding Genes

1652 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal protein l15, large subunit ribosomal protein l15XU09_C0001G0141Not AvailableNegative111660 - 11208515438.3
50s ribosomal protein l30XU09_C0001G0142Not AvailableNegative112087 - 11255417477.7
30s ribosomal protein s5, small subunit ribosomal protein s5XU09_C0001G0143Not AvailableNegative112560 - 11320723515.8
50s ribosomal protein l18, large subunit ribosomal protein l18XU09_C0001G0144Not AvailableNegative113204 - 11369218215.3
ornithine carbamoyltransferase, ornithine carbamoyltransferaseXU09_C0001G0145Not AvailableNegative113728 - 11464234149.8
signal recognition particle-docking protein ftsyXU09_C0001G0146Not AvailableNegative114639 - 11594948605.7
prefoldin subunit alpha, prefoldin alpha subunitXU09_C0001G0147Not AvailableNegative115961 - 11638315702.8
superoxide dismutase, superoxide dismutase, fe-mn familyXU09_C0001G0148Not AvailableNegative116483 - 11710323534.8
peptidase s8/s53 subtilisin kexin sedolisinXU09_C0001G0149Not AvailablePositive117183 - 11922274247.5
phosphoenolpyruvate carboxykinase (atp), phosphoenolpyruvate carboxykinase (atp)XU09_C0001G0150Not AvailableNegative119229 - 12083659121.7

Displaying genes 141 – 150 of 1687 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.