Azoarcus sp. PA01

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Rhodocyclales

Family

Zoogloeaceae

Genus

Azoarcus

Description

Azoarcus sp. PA01 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility in various environments. This organism possesses two replicons, indicating a complex genomic structure that may play a role in its adaptability and survival. The genetic information of Azoarcus sp. PA01 can be accessed through two sequence accession numbers: LARU01000005.1 and LARU00000000.1. These accessions provide a resource for researchers to study its genomic features and potential metabolic capabilities further. Azoarcus sp. species are known for their ecological roles, particularly in the nitrogen cycle and in the degradation of aromatic compounds. Their ability to thrive in diverse environments, such as soil and water, allows them to contribute significantly to biogeochemical processes. The presence of flagella suggests that Azoarcus sp. PA01 can actively navigate its environment, which may enhance its ability to locate and utilize substrates, thereby influencing microbial community dynamics and nutrient cycling. In summary, Azoarcus sp. PA01 exemplifies the features of a motile, Gram-negative bacterium with a unique genomic structure. Its ecological role is likely significant in nutrient cycling, particularly in environments rich in organic matter, where it may contribute to the breakdown of complex compounds and support ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderRhodocyclales
FamilyZoogloeaceae
GenusAzoarcus
SpeciesAzoarcus sp. PA01
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Azoarcus sp. PA01
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azoarcus sp. PA01 plasmid pPA01, whole genome shotgun sequence.

Gene Summary

Adenine Count

706626 bp

Thymine Count

703785 bp

Guanine Count

1349531 bp

Cytosine Count

1375150 bp

Genome Length

4135092 bp

Protein-coding Genes

3592 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPA01_06470Not AvailableNegative1408728 - 140911413578.3
rida family proteinPA01_06475Not AvailableNegative1409150 - 140954214272.3
nad(p)/fad-dependent oxidoreductasePA01_06480A4J778Negative1409677 - 141164772515.2
hypothetical proteinPA01_06485Not AvailableNegative1411799 - 14120448469.28
arac family transcriptional regulatorPA01_06490P43462Negative1412159 - 141316937266.8
cyclase family proteinPA01_06495A0NLY7Negative1413424 - 141421228210.3
dimethyl sulfoxide reductase anchor subunitPA01_06500Not AvailableNegative1414290 - 141519232182.3
4fe-4s dicluster domain-containing proteinPA01_06505Q9HR73Negative1415219 - 141583322734.1
molybdopterin-dependent oxidoreductasePA01_06510Not AvailableNegative1415833 - 141843696723.9
sam-dependent methyltransferasePA01_06515Not AvailablePositive1418761 - 141994243980.9

Displaying genes 1321 – 1330 of 3900 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

226 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 226 metabolites

Health Effects

No health effects information available for this bacterium.