Burkholderia sp. MSMB1835

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. MSMB1835 is characterized by having a single replicon, indicating a streamlined genetic structure. The complete genome of this strain is documented under the accession number LOYP00000000.1. Burkholderia species are known for their diverse ecological roles, often found in soil and plant environments. They can form symbiotic relationships with plants or act as pathogens in various contexts. The unique genomic traits of Burkholderia sp. MSMB1835 may contribute to its adaptability and ecological interactions within its environment. Understanding the genomic features of Burkholderia sp. MSMB1835 can provide insights into its potential biotechnological applications, such as in bioremediation or agriculture. The presence of a single replicon may suggest an efficient genetic management system, which could enhance its survival and functionality in various ecological niches. Further research could elucidate the specific roles of Burkholderia sp. MSMB1835 in its habitat, its interactions with other microorganisms, and its overall impact on ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. MSMB1835
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. MSMB1835 MSMB1835_9, whole genome shotgun

Gene Summary

Adenine Count

1170961 bp

Thymine Count

1177441 bp

Guanine Count

2418880 bp

Cytosine Count

2392233 bp

Genome Length

7159515 bp

Protein-coding Genes

6139 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine--trna ligaseWS96_13075B4EAW8Positive2727232 - 272857249616.2
hypothetical proteinWS96_13080O87406Positive2728628 - 272925722586.5
outer membrane protein assembly factor bambWS96_13085Q63UT0Positive2729299 - 273044439923.6
ribosome-associated gtpase engaWS96_13090A0K7T2Positive2730692 - 273202948942.6
rna-binding protein hfqWS96_13095A0K7T1Positive2732171 - 27324108849.7
gtpase hflxWS96_13100P25519Positive2732468 - 273365543307.5
hflk proteinWS96_13105P40605Positive2733703 - 273504948133.4
protease modulator hflcWS96_13110P44545Positive2735065 - 273596431754.5
hypothetical proteinWS96_13115Not AvailablePositive2736001 - 27361926907.94
atp phosphoribosyltransferase regulatory subunitWS96_13120A0K7S6Positive2736304 - 273745241532.8

Displaying genes 2351 – 2360 of 6249 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

396 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da

Displaying 1–10 of 396 metabolites

Health Effects

No health effects information available for this bacterium.