Burkholderia sp. LA-2-3-30-S1-D2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. LA-2-3-30-S1-D2 is characterized by possessing three distinct replicons, which may indicate a complex genomic structure that could be associated with its adaptability and metabolic versatility. The genomic data for this strain is available under the following accession numbers: NZ_CP013385.1, NZ_CP013383.1, and NZ_CP013384.1. The presence of multiple replicons suggests a potential for horizontal gene transfer, which is a notable trait within the Burkholderia genus, often linked to environmental resilience and pathogenicity. This feature may enable Burkholderia sp. LA-2-3-30-S1-D2 to acquire diverse genetic traits that enhance its survival in various ecological niches. Understanding the genomic characteristics of Burkholderia sp. LA-2-3-30-S1-D2 can provide insights into its ecological role. The ability to thrive in different environments, possibly including those that are nutrient-limited or contaminated, underscores the importance of this bacterium in bioremediation processes. Thus, the genomic features observed in Burkholderia sp. LA-2-3-30-S1-D2 reflect its potential impact on environmental microbiology and its role in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. LA-2-3-30-S1-D2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. LA-2-3-30-S1-D2 chromosome 1, complete sequence.

Gene Summary

Adenine Count

580231 bp

Thymine Count

580397 bp

Guanine Count

1141971 bp

Cytosine Count

1142741 bp

Genome Length

3445340 bp

Protein-coding Genes

3061 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tsseWS66_RS27530Not AvailableNegative3140859 - 314134418159.8
type vi secretion system tube protein hcpWS66_RS27535Not AvailableNegative3141407 - 314191018423.6
type vi secretion system contractile sheath large subunitWS66_RS27540Not AvailableNegative3141981 - 314347154857.5
type vi secretion system contractile sheath small subunitWS66_RS27545Not AvailableNegative3143487 - 314400219232.9
m48 family metallopeptidaseWS66_RS27550Not AvailableNegative3144047 - 314468221972.9
type vi secretion system lipoprotein tssjWS66_RS27555Not AvailablePositive3145060 - 314567121349.0
type vi secretion system baseplate subunit tsskWS66_RS27560Not AvailablePositive3145775 - 314712149935.8
type ivb secretion system protein icmh/dotuWS66_RS27565Not AvailablePositive3147118 - 314790028982.1
is4 family transposaseWS66_RS27570Not AvailableNegative3147970 - 314929250224.8
lipoyl synthaseWS66_RS27575Not AvailableNegative3149440 - 315043236520.8

Displaying genes 2921 – 2930 of 6550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.