Burkholderia sp. LA-2-3-30-S1-D2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. LA-2-3-30-S1-D2 is characterized by possessing three distinct replicons, which may indicate a complex genomic structure that could be associated with its adaptability and metabolic versatility. The genomic data for this strain is available under the following accession numbers: NZ_CP013385.1, NZ_CP013383.1, and NZ_CP013384.1. The presence of multiple replicons suggests a potential for horizontal gene transfer, which is a notable trait within the Burkholderia genus, often linked to environmental resilience and pathogenicity. This feature may enable Burkholderia sp. LA-2-3-30-S1-D2 to acquire diverse genetic traits that enhance its survival in various ecological niches. Understanding the genomic characteristics of Burkholderia sp. LA-2-3-30-S1-D2 can provide insights into its ecological role. The ability to thrive in different environments, possibly including those that are nutrient-limited or contaminated, underscores the importance of this bacterium in bioremediation processes. Thus, the genomic features observed in Burkholderia sp. LA-2-3-30-S1-D2 reflect its potential impact on environmental microbiology and its role in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. LA-2-3-30-S1-D2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. LA-2-3-30-S1-D2 chromosome 1, complete sequence.

Gene Summary

Adenine Count

580231 bp

Thymine Count

580397 bp

Guanine Count

1141971 bp

Cytosine Count

1142741 bp

Genome Length

3445340 bp

Protein-coding Genes

3061 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseWS66_RS22720Not AvailableNegative2118609 - 211963435701.6
sugar abc transporter atp-binding proteinWS66_RS22725Not AvailableNegative2119662 - 212123657608.3
sugar abc transporter substrate-binding proteinWS66_RS22730Not AvailableNegative2121305 - 212223132713.7
bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolaseWS66_RS22735Not AvailablePositive2122540 - 212449871349.2
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)WS66_RS22740Not AvailablePositive2124545 - 212642867103.2
myo-inosose-2 dehydrataseWS66_RS22745Not AvailablePositive2126490 - 212741933747.2
5-deoxy-glucuronate isomeraseWS66_RS22750Not AvailablePositive2127462 - 212828029963.2
heme-degrading domain-containing proteinWS66_RS22755Not AvailablePositive2128373 - 212886717253.7
glucose 1-dehydrogenaseWS66_RS22760Not AvailableNegative2128890 - 212963625237.1
abc transporter atp-binding proteinWS66_RS22765Not AvailableNegative2129799 - 213050324399.0

Displaying genes 1991 – 2000 of 6550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.