Burkholderia sp. LA-2-3-30-S1-D2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. LA-2-3-30-S1-D2 is characterized by possessing three distinct replicons, which may indicate a complex genomic structure that could be associated with its adaptability and metabolic versatility. The genomic data for this strain is available under the following accession numbers: NZ_CP013385.1, NZ_CP013383.1, and NZ_CP013384.1. The presence of multiple replicons suggests a potential for horizontal gene transfer, which is a notable trait within the Burkholderia genus, often linked to environmental resilience and pathogenicity. This feature may enable Burkholderia sp. LA-2-3-30-S1-D2 to acquire diverse genetic traits that enhance its survival in various ecological niches. Understanding the genomic characteristics of Burkholderia sp. LA-2-3-30-S1-D2 can provide insights into its ecological role. The ability to thrive in different environments, possibly including those that are nutrient-limited or contaminated, underscores the importance of this bacterium in bioremediation processes. Thus, the genomic features observed in Burkholderia sp. LA-2-3-30-S1-D2 reflect its potential impact on environmental microbiology and its role in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. LA-2-3-30-S1-D2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. LA-2-3-30-S1-D2 chromosome 1, complete sequence.

Gene Summary

Adenine Count

580231 bp

Thymine Count

580397 bp

Guanine Count

1141971 bp

Cytosine Count

1142741 bp

Genome Length

3445340 bp

Protein-coding Genes

3061 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspmWS66_RS12820Not AvailableNegative51859 - 5236518289.9
type ii secretion system protein gsplWS66_RS12825Not AvailableNegative52362 - 5372347966.9
type ii secretion system minor pseudopilin gspkWS66_RS12830Not AvailableNegative53748 - 5487240290.6
type ii secretion system protein jWS66_RS12835Not AvailableNegative54875 - 5557925349.9
type ii secretion system minor pseudopilin gspiWS66_RS12840Not AvailableNegative55557 - 5595514211.3
gsph/fimt family pseudopilinWS66_RS12845Not AvailableNegative55958 - 5649419315.1
type ii secretion system major pseudopilin gspgWS66_RS12850Not AvailableNegative56537 - 5698916757.0
type ii secretion system protein nWS66_RS12855Not AvailablePositive57168 - 5757814104.2
type ii secretion system inner membrane protein gspfWS66_RS12860Not AvailableNegative57609 - 5882644030.4
type ii secretion system atpase gspeWS66_RS12865Not AvailableNegative58831 - 6033054175.0

Displaying genes 161 – 170 of 6550 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.