Planctomyces sp. SH-PL62

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Planctomyces

Description

Planctomyces sp. SH-PL62 is characterized by its possession of five replicons, which indicates a complex genomic architecture typical of certain members of the Planctomycetes phylum. This organism has several genomic accessions, specifically NZ_CP011275.1, NZ_CP011273.1, NZ_CP011274.1, NZ_CP011276.1, and NZ_CP011277.1, which provide a comprehensive insight into its genetic material and potential functional capabilities. Planctomyces species are generally known for their unique cell structure, which includes a lack of peptidoglycan in their cell wall and the presence of an extensive intracellular compartmentalization. This structural uniqueness may play a significant role in their ecological niche, enabling them to thrive in a variety of aquatic environments, often in association with organic matter. The presence of five replicons suggests a robust genomic flexibility that may facilitate adaptation to different environmental conditions, potentially enhancing survivability in fluctuating habitats. Planctomyces sp. SH-PL62 may contribute to biogeochemical cycles, particularly in the decomposition of organic materials, underscoring the ecological importance of this microorganism in its natural habitat. Further research may elucidate its specific metabolic pathways and ecological roles, contributing to our understanding of microbial diversity and function in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusPlanctomyces
SpeciesPlanctomyces sp. SH-PL62
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planctomyces sp. SH-PL62 chromosome, complete genome.

Gene Summary

Adenine Count

998928 bp

Thymine Count

998531 bp

Guanine Count

2254977 bp

Cytosine Count

2254666 bp

Genome Length

6507102 bp

Protein-coding Genes

5054 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinVT85_RS21015Not AvailableNegative5412620 - 541504689737.5
fatty acid desaturase family proteinVT85_RS21020Not AvailablePositive5415804 - 541708448273.8
glycosyltransferase family 2 proteinVT85_RS21025Not AvailableNegative5417115 - 541818539230.1
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferaseVT85_RS21030Not AvailableNegative5418146 - 541926441879.7
glycosyltransferase family 2 proteinVT85_RS21035Not AvailablePositive5419490 - 542058440298.3
glycosyltransferase family 39 proteinVT85_RS21040Not AvailablePositive5420643 - 542221155190.6
glycosyltransferase family 39 proteinVT85_RS21045Not AvailablePositive5422240 - 542387458298.3
phospholipid carrier-dependent glycosyltransferaseVT85_RS21050Not AvailablePositive5423892 - 542561061749.8
duf2142 domain-containing proteinVT85_RS21055Not AvailableNegative5425568 - 542731362364.1
stas domain-containing proteinVT85_RS21060Not AvailableNegative5427437 - 542779013626.3

Displaying genes 4191 – 4200 of 5263 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.