Planctomyces sp. SH-PL62

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Planctomyces

Description

Planctomyces sp. SH-PL62 is characterized by its possession of five replicons, which indicates a complex genomic architecture typical of certain members of the Planctomycetes phylum. This organism has several genomic accessions, specifically NZ_CP011275.1, NZ_CP011273.1, NZ_CP011274.1, NZ_CP011276.1, and NZ_CP011277.1, which provide a comprehensive insight into its genetic material and potential functional capabilities. Planctomyces species are generally known for their unique cell structure, which includes a lack of peptidoglycan in their cell wall and the presence of an extensive intracellular compartmentalization. This structural uniqueness may play a significant role in their ecological niche, enabling them to thrive in a variety of aquatic environments, often in association with organic matter. The presence of five replicons suggests a robust genomic flexibility that may facilitate adaptation to different environmental conditions, potentially enhancing survivability in fluctuating habitats. Planctomyces sp. SH-PL62 may contribute to biogeochemical cycles, particularly in the decomposition of organic materials, underscoring the ecological importance of this microorganism in its natural habitat. Further research may elucidate its specific metabolic pathways and ecological roles, contributing to our understanding of microbial diversity and function in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusPlanctomyces
SpeciesPlanctomyces sp. SH-PL62
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planctomyces sp. SH-PL62 chromosome, complete genome.

Gene Summary

Adenine Count

998928 bp

Thymine Count

998531 bp

Guanine Count

2254977 bp

Cytosine Count

2254666 bp

Genome Length

6507102 bp

Protein-coding Genes

5054 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-like domain-containing proteinVT85_RS06050Not AvailableNegative1546844 - 154853861140.3
ribose-phosphate diphosphokinaseVT85_RS06055Not AvailablePositive1548845 - 154982535979.5
sgnh/gdsl hydrolase family proteinVT85_RS06060Not AvailablePositive1550422 - 155115926522.4
pep-cterm sorting domain-containing proteinVT85_RS06065Not AvailablePositive1551872 - 155260925272.1
pep-cterm sorting domain-containing proteinVT85_RS06070Not AvailablePositive1552746 - 155349225855.0
3-deoxy-manno-octulosonate cytidylyltransferaseVT85_RS06075Not AvailableNegative1553570 - 155432827419.8
s8 family peptidaseVT85_RS06080Not AvailablePositive1555000 - 155682361969.8
sdr family oxidoreductaseVT85_RS06085Not AvailablePositive1556952 - 155768625621.0
abc transporter atp-binding proteinVT85_RS06090Not AvailableNegative1557763 - 155972471684.5
abc transporter permeaseVT85_RS06095Not AvailableNegative1559882 - 156069429264.7

Displaying genes 1191 – 1200 of 5263 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.