Novosphingobium sp. MD-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. MD-1 is a bacterial species notable for its possession of flagella, which facilitates motility in various environments. This trait enables the organism to navigate toward nutrient-rich areas or away from harmful substances, enhancing its survival and adaptability. The genome of Novosphingobium sp. MD-1 is characterized by having a single replicon, suggesting a streamlined genetic organization that may contribute to its efficiency in replication and resource utilization. The reference genome for this species is available under the accession number BBXA00000000.1, providing a basis for further genomic studies and comparisons with related species. Ecologically, Novosphingobium sp. MD-1 may play a significant role in its habitat, particularly in biogeochemical cycles, as members of the Novosphingobium genus are often associated with the degradation of environmental pollutants. The presence of flagella enhances its ability to colonize diverse niches, potentially linking it to bioremediation processes in contaminated environments. The combination of motility and genomic adaptability positions Novosphingobium sp. MD-1 as a noteworthy organism in both microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. MD-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. MD-1 DNA, contig: contig34, whole genome

Gene Summary

Adenine Count

787502 bp

Thymine Count

790702 bp

Guanine Count

1523476 bp

Cytosine Count

1516086 bp

Genome Length

4617766 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
camp-binding proteins - catabolite gene activator and regulatory subunit of camp-dependent protein kinasesNMD1_04213Not AvailableNegative4598279 - 459889622127.8
long-chain-acyl-coa dehydrogenaseNMD1_04214Not AvailablePositive4599355 - 460055444498.8
acyl-coa dehydrogenase family proteinNMD1_04215Not AvailablePositive4600606 - 460173640543.8
hypothetical proteinNMD1_04216Not AvailablePositive4601782 - 460344057651.4
vitamin b12 abc transporter, atpase component btudNMD1_04217Not AvailableNegative4603456 - 460419625425.0
vitamin b12 abc transporter, permease component btucNMD1_04218Not AvailableNegative4604196 - 460516132760.9
abc-type fe3+-hydroxamate transport system, periplasmic componentNMD1_04219Not AvailableNegative4605158 - 460601830025.4
outer membrane vitamin b12 receptor btubNMD1_04220Not AvailableNegative4606032 - 460793668214.3
hypothetical proteinNMD1_04221Not AvailablePositive4607973 - 46082489395.13
cell wall hydrolysesNMD1_04222Not AvailablePositive4608395 - 460976548164.5

Displaying genes 4231 – 4240 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.