Novosphingobium sp. MD-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. MD-1 is a bacterial species notable for its possession of flagella, which facilitates motility in various environments. This trait enables the organism to navigate toward nutrient-rich areas or away from harmful substances, enhancing its survival and adaptability. The genome of Novosphingobium sp. MD-1 is characterized by having a single replicon, suggesting a streamlined genetic organization that may contribute to its efficiency in replication and resource utilization. The reference genome for this species is available under the accession number BBXA00000000.1, providing a basis for further genomic studies and comparisons with related species. Ecologically, Novosphingobium sp. MD-1 may play a significant role in its habitat, particularly in biogeochemical cycles, as members of the Novosphingobium genus are often associated with the degradation of environmental pollutants. The presence of flagella enhances its ability to colonize diverse niches, potentially linking it to bioremediation processes in contaminated environments. The combination of motility and genomic adaptability positions Novosphingobium sp. MD-1 as a noteworthy organism in both microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. MD-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. MD-1 DNA, contig: contig34, whole genome

Gene Summary

Adenine Count

787502 bp

Thymine Count

790702 bp

Guanine Count

1523476 bp

Cytosine Count

1516086 bp

Genome Length

4617766 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
universal stress family proteinNMD1_03293Not AvailablePositive3613209 - 361367016246.5
3'-to-5' exoribonuclease rnase rNMD1_03294Not AvailableNegative3614209 - 361651284383.5
leucine aminopeptidase-related proteinNMD1_03295Not AvailableNegative3616569 - 361789447294.6
prolyl-trna synthetaseNMD1_03296Not AvailableNegative3617983 - 361953057287.6
phbfNMD1_03297Not AvailableNegative3619645 - 362023221782.1
alanine racemaseNMD1_03298Not AvailableNegative3620283 - 362135637887.6
permeases of the major facilitator superfamilyNMD1_03299Not AvailableNegative3621337 - 362295357338.8
iron-sulfur cluster assembly scaffold protein iscuNMD1_03300Not AvailableNegative3623019 - 362344714350.0
colicin v production proteinNMD1_03301Not AvailableNegative3623451 - 362407122274.1
dna repair protein radaNMD1_03302Not AvailableNegative3624084 - 362545147882.9

Displaying genes 3311 – 3320 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.