Novosphingobium sp. MD-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. MD-1 is a bacterial species notable for its possession of flagella, which facilitates motility in various environments. This trait enables the organism to navigate toward nutrient-rich areas or away from harmful substances, enhancing its survival and adaptability. The genome of Novosphingobium sp. MD-1 is characterized by having a single replicon, suggesting a streamlined genetic organization that may contribute to its efficiency in replication and resource utilization. The reference genome for this species is available under the accession number BBXA00000000.1, providing a basis for further genomic studies and comparisons with related species. Ecologically, Novosphingobium sp. MD-1 may play a significant role in its habitat, particularly in biogeochemical cycles, as members of the Novosphingobium genus are often associated with the degradation of environmental pollutants. The presence of flagella enhances its ability to colonize diverse niches, potentially linking it to bioremediation processes in contaminated environments. The combination of motility and genomic adaptability positions Novosphingobium sp. MD-1 as a noteworthy organism in both microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. MD-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. MD-1 DNA, contig: contig34, whole genome

Gene Summary

Adenine Count

787502 bp

Thymine Count

790702 bp

Guanine Count

1523476 bp

Cytosine Count

1516086 bp

Genome Length

4617766 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl transferase of group 1 family proteinNMD1_02456Not AvailablePositive2699608 - 270067840230.5
glucose-1-phosphate thymidylyltransferaseNMD1_02457Not AvailablePositive2700844 - 270172531802.2
dtdp-4-dehydrorhamnose 3,5-epimeraseNMD1_02458Not AvailablePositive2701722 - 270226720126.8
dtdp-4-dehydrorhamnose reductaseNMD1_02459Not AvailablePositive2702264 - 270312129640.1
dtdp-glucose 4,6-dehydrataseNMD1_02460Not AvailablePositive2703114 - 270417838804.4
acyltransferase 3NMD1_02461Not AvailablePositive2704378 - 270536136716.2
hypothetical proteinNMD1_02462Not AvailablePositive2705809 - 27059404786.91
capsular polysaccharide biosynthesis proteinNMD1_02463Not AvailableNegative2705989 - 270729948508.7
ribosomal large subunit pseudouridine synthase dNMD1_02464Not AvailablePositive2707851 - 270882834397.7
rna polymerase sigma factor rpohNMD1_02465Not AvailablePositive2708950 - 270985234566.5

Displaying genes 2511 – 2520 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.