Novosphingobium sp. MD-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. MD-1 is a bacterial species notable for its possession of flagella, which facilitates motility in various environments. This trait enables the organism to navigate toward nutrient-rich areas or away from harmful substances, enhancing its survival and adaptability. The genome of Novosphingobium sp. MD-1 is characterized by having a single replicon, suggesting a streamlined genetic organization that may contribute to its efficiency in replication and resource utilization. The reference genome for this species is available under the accession number BBXA00000000.1, providing a basis for further genomic studies and comparisons with related species. Ecologically, Novosphingobium sp. MD-1 may play a significant role in its habitat, particularly in biogeochemical cycles, as members of the Novosphingobium genus are often associated with the degradation of environmental pollutants. The presence of flagella enhances its ability to colonize diverse niches, potentially linking it to bioremediation processes in contaminated environments. The combination of motility and genomic adaptability positions Novosphingobium sp. MD-1 as a noteworthy organism in both microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. MD-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. MD-1 DNA, contig: contig34, whole genome

Gene Summary

Adenine Count

787502 bp

Thymine Count

790702 bp

Guanine Count

1523476 bp

Cytosine Count

1516086 bp

Genome Length

4617766 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flda proteinNMD1_02196Not AvailableNegative2421618 - 242267936632.3
4-carboxy-4-hydroxy-2-oxoadipate aldolaseNMD1_02197Not AvailableNegative2422803 - 242347723577.4
transcriptional regulator of lysr familyNMD1_02198Not AvailablePositive2423590 - 242474440632.6
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenasesNMD1_02199Not AvailablePositive2424808 - 242569530374.4
4-oxalomesaconate hydrataseNMD1_02200Not AvailablePositive2425692 - 242671738099.7
protocatechuate 4,5-dioxygenase alpha chainNMD1_02201Not AvailablePositive2426714 - 242714816566.4
protocatechuate 4,5-dioxygenase beta chainNMD1_02202Not AvailablePositive2427150 - 242799231298.3
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenaseNMD1_02203Not AvailablePositive2428057 - 242900134483.9
hypothetical protein in cluster with at3g50560-like gene familyNMD1_02204Not AvailablePositive2429135 - 242992329119.2
lignostilbene-alpha,beta-dioxygenase and related enzymesNMD1_02205Not AvailablePositive2430379 - 243186354083.8

Displaying genes 2251 – 2260 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.