Novosphingobium sp. MD-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. MD-1 is a bacterial species notable for its possession of flagella, which facilitates motility in various environments. This trait enables the organism to navigate toward nutrient-rich areas or away from harmful substances, enhancing its survival and adaptability. The genome of Novosphingobium sp. MD-1 is characterized by having a single replicon, suggesting a streamlined genetic organization that may contribute to its efficiency in replication and resource utilization. The reference genome for this species is available under the accession number BBXA00000000.1, providing a basis for further genomic studies and comparisons with related species. Ecologically, Novosphingobium sp. MD-1 may play a significant role in its habitat, particularly in biogeochemical cycles, as members of the Novosphingobium genus are often associated with the degradation of environmental pollutants. The presence of flagella enhances its ability to colonize diverse niches, potentially linking it to bioremediation processes in contaminated environments. The combination of motility and genomic adaptability positions Novosphingobium sp. MD-1 as a noteworthy organism in both microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. MD-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. MD-1 DNA, contig: contig34, whole genome

Gene Summary

Adenine Count

787502 bp

Thymine Count

790702 bp

Guanine Count

1523476 bp

Cytosine Count

1516086 bp

Genome Length

4617766 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fatty acid hydroxylase-like proteinNMD1_01974Not AvailablePositive2184098 - 218464620796.6
glycosyl transferase, group 1NMD1_01975Not AvailableNegative2184650 - 218585844327.8
capsular polysaccharide biosynthesis/export periplasmic protein wcbaNMD1_01976Not AvailableNegative2185855 - 218745957132.8
phosphoglycerate mutaseNMD1_01977Not AvailableNegative2187480 - 218809421752.9
3-deoxy-manno-octulosonate cytidylyltransferaseNMD1_01978Not AvailableNegative2188103 - 218894529897.8
arabinose 5-phosphate isomeraseNMD1_01979Not AvailableNegative2188938 - 218993035175.6
2-keto-3-deoxy-d-manno-octulosonate-8-phosphate synthaseNMD1_01980Not AvailablePositive2190131 - 219095829288.2
capsular polysaccharide biosynthesis/export periplasmic protein wcbcNMD1_01981Not AvailableNegative2191335 - 219238437055.4
hypothetical proteinNMD1_01982Not AvailablePositive2193450 - 21936868358.96
udp-glucose 4-epimeraseNMD1_01983Not AvailableNegative2193695 - 219422219111.1

Displaying genes 2051 – 2060 of 4247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.