Dermabacter vaginalis str. AD1_86

rodfacultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Dermabacter

Description

Dermabacter vaginalis strain AD1_86 is a Gram-positive, non-motile rod-shaped bacterium that predominantly inhabits the vagina of Homo sapiens. As a facultative aerobe/anaerobe, it can thrive in both oxygen-rich and oxygen-poor environments, which is advantageous in the variable conditions of the vaginal microbiome. This bacterium is mesophilic, with an optimal growth temperature of 37°C, aligning with the average human body temperature and allowing for effective colonization in its host. The genomic structure of Dermabacter vaginalis AD1_86 is characterized by a single replicon, indicating a streamlined genomic organization that may reflect its specialized adaptation to the vaginal environment. The accession number NZ_CP012117.1 provides a reference point for genetic studies and further research into the strain's characteristics and potential roles within the microbiome. The presence of Dermabacter vaginalis in the vagina suggests its involvement in maintaining the health of this ecosystem, potentially playing a role in competitive inhibition of pathogenic organisms or contributing to the overall balance of the vaginal microbiota. Understanding the traits of this bacterium can provide insights into its ecological niche and its interactions with both the host and other microbial species, highlighting its importance in vaginal health and disease prevention.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusDermabacter
SpeciesDermabacter vaginalis
StrainAD1_86

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature37
Temperature rangemesophilic
Habitatvagina
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermabacter vaginalis strain AD1-86 chromosome, complete genome.

Gene Summary

Adenine Count

444579 bp

Thymine Count

450433 bp

Guanine Count

752856 bp

Cytosine Count

744446 bp

Genome Length

2392314 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-ribosylhomocysteine lyaseDAD186_RS04295Not AvailablePositive1010283 - 101075017258.4
dolichyl-phosphate-mannose--protein mannosyltransferaseDAD186_RS04300Not AvailableNegative1010769 - 101235859739.6
16s rrna (cytidine(1402)-2'-o)-methyltransferaseDAD186_RS04305Not AvailablePositive1012396 - 101326231202.1
50s ribosomal protein l32DAD186_RS04310Not AvailableNegative1013315 - 10134856401.89
tatd family hydrolaseDAD186_RS04315Not AvailablePositive1013707 - 101466934974.1
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaDAD186_RS04320Not AvailablePositive1014666 - 101556232010.5
abc-f family atp-binding cassette domain-containing proteinDAD186_RS04325Not AvailablePositive1015624 - 101742666442.9
hypothetical proteinDAD186_RS04330Not AvailableNegative1017434 - 101776312169.5
tfiib-type zinc ribbon-containing proteinDAD186_RS04335Not AvailableNegative1017760 - 101901346214.5
spfh domain-containing proteinDAD186_RS04340Not AvailableNegative1019103 - 102031742986.2

Displaying genes 861 – 870 of 2100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.