Dermabacter vaginalis str. AD1_86

rodfacultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Dermabacter

Description

Dermabacter vaginalis strain AD1_86 is a Gram-positive, non-motile rod-shaped bacterium that predominantly inhabits the vagina of Homo sapiens. As a facultative aerobe/anaerobe, it can thrive in both oxygen-rich and oxygen-poor environments, which is advantageous in the variable conditions of the vaginal microbiome. This bacterium is mesophilic, with an optimal growth temperature of 37°C, aligning with the average human body temperature and allowing for effective colonization in its host. The genomic structure of Dermabacter vaginalis AD1_86 is characterized by a single replicon, indicating a streamlined genomic organization that may reflect its specialized adaptation to the vaginal environment. The accession number NZ_CP012117.1 provides a reference point for genetic studies and further research into the strain's characteristics and potential roles within the microbiome. The presence of Dermabacter vaginalis in the vagina suggests its involvement in maintaining the health of this ecosystem, potentially playing a role in competitive inhibition of pathogenic organisms or contributing to the overall balance of the vaginal microbiota. Understanding the traits of this bacterium can provide insights into its ecological niche and its interactions with both the host and other microbial species, highlighting its importance in vaginal health and disease prevention.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusDermabacter
SpeciesDermabacter vaginalis
StrainAD1_86

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature37
Temperature rangemesophilic
Habitatvagina
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermabacter vaginalis strain AD1-86 chromosome, complete genome.

Gene Summary

Adenine Count

444579 bp

Thymine Count

450433 bp

Guanine Count

752856 bp

Cytosine Count

744446 bp

Genome Length

2392314 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylformylglycinamidine synthase subunit purqDAD186_RS02735Not AvailableNegative653874 - 65460225930.7
phosphoribosylformylglycinamidine synthase subunit pursDAD186_RS02740Not AvailableNegative654602 - 6548599484.48
mbl fold metallo-hydrolaseDAD186_RS02745Not AvailablePositive654977 - 65572026477.2
pyruvate formate-lyase-activating proteinDAD186_RS02750Not AvailableNegative655717 - 65658332186.2
autonomous glycyl radical cofactor grca2DAD186_RS02755Not AvailableNegative656748 - 6569999516.25
pyruvate formate lyase family proteinDAD186_RS02760Not AvailableNegative657101 - 65921878567.6
phosphoribosylaminoimidazolesuccinocarboxamide synthaseDAD186_RS02765Not AvailableNegative659377 - 66029133061.7
phosphoribosylamine--glycine ligaseDAD186_RS02770Not AvailableNegative660288 - 66159245659.4
trna pseudouridine(38-40) synthase truaDAD186_RS02775Not AvailablePositive661629 - 66253433362.7
50s ribosomal protein l13DAD186_RS02780Not AvailablePositive662888 - 66333116453.0

Displaying genes 551 – 560 of 2100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.