Dermabacter vaginalis str. AD1_86

rodfacultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Dermabacter

Description

Dermabacter vaginalis strain AD1_86 is a Gram-positive, non-motile rod-shaped bacterium that predominantly inhabits the vagina of Homo sapiens. As a facultative aerobe/anaerobe, it can thrive in both oxygen-rich and oxygen-poor environments, which is advantageous in the variable conditions of the vaginal microbiome. This bacterium is mesophilic, with an optimal growth temperature of 37°C, aligning with the average human body temperature and allowing for effective colonization in its host. The genomic structure of Dermabacter vaginalis AD1_86 is characterized by a single replicon, indicating a streamlined genomic organization that may reflect its specialized adaptation to the vaginal environment. The accession number NZ_CP012117.1 provides a reference point for genetic studies and further research into the strain's characteristics and potential roles within the microbiome. The presence of Dermabacter vaginalis in the vagina suggests its involvement in maintaining the health of this ecosystem, potentially playing a role in competitive inhibition of pathogenic organisms or contributing to the overall balance of the vaginal microbiota. Understanding the traits of this bacterium can provide insights into its ecological niche and its interactions with both the host and other microbial species, highlighting its importance in vaginal health and disease prevention.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusDermabacter
SpeciesDermabacter vaginalis
StrainAD1_86

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature37
Temperature rangemesophilic
Habitatvagina
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermabacter vaginalis strain AD1-86 chromosome, complete genome.

Gene Summary

Adenine Count

444579 bp

Thymine Count

450433 bp

Guanine Count

752856 bp

Cytosine Count

744446 bp

Genome Length

2392314 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamyl-trna reductaseDAD186_RS09445Not AvailableNegative2139612 - 214105150935.4
uroporphyrinogen decarboxylaseDAD186_RS09450Not AvailablePositive2141110 - 214218938863.6
protoporphyrinogen oxidaseDAD186_RS09455Not AvailablePositive2142201 - 214364051177.2
hydrogen peroxide-dependent heme synthaseDAD186_RS09460Not AvailablePositive2143676 - 214437126974.8
ferrochelataseDAD186_RS09465Not AvailablePositive2144368 - 214549841808.0
hydroxymethylbilane synthaseDAD186_RS09470Not AvailablePositive2145495 - 214643933016.4
uroporphyrinogen-iii synthaseDAD186_RS09475Not AvailablePositive2146436 - 214718826287.2
porphobilinogen synthaseDAD186_RS09480Not AvailablePositive2147192 - 214820236347.4
glutamate-1-semialdehyde 2,1-aminomutaseDAD186_RS09485Not AvailablePositive2148226 - 214951244459.7
hypothetical proteinDAD186_RS09490Not AvailablePositive2149517 - 215005618430.5

Displaying genes 1891 – 1900 of 2100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.