Dermabacter vaginalis str. AD1_86

rodfacultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Dermabacter

Description

Dermabacter vaginalis strain AD1_86 is a Gram-positive, non-motile rod-shaped bacterium that predominantly inhabits the vagina of Homo sapiens. As a facultative aerobe/anaerobe, it can thrive in both oxygen-rich and oxygen-poor environments, which is advantageous in the variable conditions of the vaginal microbiome. This bacterium is mesophilic, with an optimal growth temperature of 37°C, aligning with the average human body temperature and allowing for effective colonization in its host. The genomic structure of Dermabacter vaginalis AD1_86 is characterized by a single replicon, indicating a streamlined genomic organization that may reflect its specialized adaptation to the vaginal environment. The accession number NZ_CP012117.1 provides a reference point for genetic studies and further research into the strain's characteristics and potential roles within the microbiome. The presence of Dermabacter vaginalis in the vagina suggests its involvement in maintaining the health of this ecosystem, potentially playing a role in competitive inhibition of pathogenic organisms or contributing to the overall balance of the vaginal microbiota. Understanding the traits of this bacterium can provide insights into its ecological niche and its interactions with both the host and other microbial species, highlighting its importance in vaginal health and disease prevention.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusDermabacter
SpeciesDermabacter vaginalis
StrainAD1_86

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature37
Temperature rangemesophilic
Habitatvagina
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermabacter vaginalis strain AD1-86 chromosome, complete genome.

Gene Summary

Adenine Count

444579 bp

Thymine Count

450433 bp

Guanine Count

752856 bp

Cytosine Count

744446 bp

Genome Length

2392314 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-tetrahydrodipicolinate reductaseDAD186_RS08090Not AvailableNegative1836742 - 183750626752.8
pitrilysin family proteinDAD186_RS08095Not AvailableNegative1837538 - 183889648586.6
rdd family proteinDAD186_RS08100Not AvailablePositive1838991 - 183962021092.8
polyribonucleotide nucleotidyltransferaseDAD186_RS08105Not AvailableNegative1839705 - 184194279952.2
30s ribosomal protein s15DAD186_RS08110Not AvailableNegative1842134 - 184240310519.8
bifunctional riboflavin kinase/fad synthetaseDAD186_RS08115Not AvailableNegative1842507 - 184351437178.9
l,d-transpeptidase family proteinDAD186_RS08120Not AvailablePositive1843701 - 184519753863.5
trna pseudouridine(55) synthase trubDAD186_RS08125Not AvailableNegative1845194 - 184617734340.0
30s ribosome-binding factor rbfaDAD186_RS08130Not AvailableNegative1846170 - 184661916599.4
trm11 family methyltransferaseDAD186_RS08135Not AvailableNegative1846654 - 184775139976.6

Displaying genes 1621 – 1630 of 2100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.