Dermabacter vaginalis str. AD1_86

rodfacultative aerobe/anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Dermabacter

Description

Dermabacter vaginalis strain AD1_86 is a Gram-positive, non-motile rod-shaped bacterium that predominantly inhabits the vagina of Homo sapiens. As a facultative aerobe/anaerobe, it can thrive in both oxygen-rich and oxygen-poor environments, which is advantageous in the variable conditions of the vaginal microbiome. This bacterium is mesophilic, with an optimal growth temperature of 37°C, aligning with the average human body temperature and allowing for effective colonization in its host. The genomic structure of Dermabacter vaginalis AD1_86 is characterized by a single replicon, indicating a streamlined genomic organization that may reflect its specialized adaptation to the vaginal environment. The accession number NZ_CP012117.1 provides a reference point for genetic studies and further research into the strain's characteristics and potential roles within the microbiome. The presence of Dermabacter vaginalis in the vagina suggests its involvement in maintaining the health of this ecosystem, potentially playing a role in competitive inhibition of pathogenic organisms or contributing to the overall balance of the vaginal microbiota. Understanding the traits of this bacterium can provide insights into its ecological niche and its interactions with both the host and other microbial species, highlighting its importance in vaginal health and disease prevention.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusDermabacter
SpeciesDermabacter vaginalis
StrainAD1_86

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature37
Temperature rangemesophilic
Habitatvagina
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermabacter vaginalis strain AD1-86 chromosome, complete genome.

Gene Summary

Adenine Count

444579 bp

Thymine Count

450433 bp

Guanine Count

752856 bp

Cytosine Count

744446 bp

Genome Length

2392314 bp

Protein-coding Genes

2039 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endolytic transglycosylase mltgDAD186_RS05195Not AvailablePositive1200938 - 120208641426.5
shikimate dehydrogenaseDAD186_RS05200Not AvailablePositive1202068 - 120295831724.9
trna (cytidine(34)-2'-o)-methyltransferaseDAD186_RS05205Not AvailableNegative1202955 - 120341917232.5
Trna-leuNot AvailableNot AvailablePositive1203573 - 1203661Not Available
lpxtg cell wall anchor domain-containing proteinDAD186_RS05215Not AvailablePositive1204295 - 120513129184.1
prepilin peptidaseDAD186_RS05220Not AvailableNegative1205308 - 120581117305.8
duf5703 family proteinDAD186_RS05225Not AvailableNegative1205874 - 120616110783.1
dna primaseDAD186_RS05230Not AvailablePositive1206274 - 120657311353.1
undecaprenyl-diphosphate phosphataseDAD186_RS05235Not AvailablePositive1206719 - 120759130966.6
proteasome assembly chaperone family proteinDAD186_RS05240Not AvailableNegative1207629 - 120847130847.2

Displaying genes 1041 – 1050 of 2100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.