Paraclostridium benzoelyticum str. JC272

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptostreptococcaceae

Genus

Paraclostridium

Description

Paraclostridium benzoelyticum strain JC272 is a Gram-positive, anaerobic bacterium characterized by its rod shape and ability to form spores. This organism is classified as a heterotroph, organotroph, and chemotroph, indicating its capacity to utilize organic compounds as its energy source. The optimal growth temperature for P. benzoelyticum JC272 is 32°C, placing it within the mesophilic temperature range. The presence of true flagella suggests that this bacterium is motile, which may facilitate its movement in anaerobic environments. P. benzoelyticum JC272 has a single replicon, indicating a streamlined genomic organization that is typical for many bacteria. The ability to form spores is a significant trait, as it allows P. benzoelyticum JC272 to survive in harsh conditions by entering a dormant state. This sporulation capability could enable the organism to persist in fluctuating environments where nutrients may be limited or conditions become unfavorable. Ecologically, P. benzoelyticum JC272 likely plays a role in anaerobic processes, such as those found in soil and sediment environments, where organic matter decomposition is essential for nutrient cycling. The ability to utilize various organic substrates could contribute to the breakdown of complex compounds, promoting soil health and functioning as a key player in the ecosystem's microbial community. The accession number for this strain is LBBT00000000.1, which provides a reference for further genomic studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptostreptococcaceae
GenusParaclostridium
SpeciesParaclostridium benzoelyticum
StrainJC272

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Paraclostridium benzoelyticum str. JC272
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceheterotroph; organotroph; chemotroph
PathogenicityNot Available

Genome Summary

Paraclostridium benzoelyticum strain JC272 contig396, whole genome

Gene Summary

Adenine Count

1282964 bp

Thymine Count

1268371 bp

Guanine Count

507892 bp

Cytosine Count

496730 bp

Genome Length

3555957 bp

Protein-coding Genes

3242 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna repair exonucleaseVN21_07110Q5HPJ4Positive1381569 - 138277146058.2
hypothetical proteinVN21_07115Q9KM67Positive1382771 - 138413952963.2
kipi antagonistVN21_07120Q7WY77Negative1384146 - 138516237555.4
allophanate hydrolaseVN21_07125P60495Negative1385182 - 138585625403.0
membrane proteinVN21_07130P42964Negative1385886 - 138707641663.6
lamb/ycsf family proteinVN21_07135Q18BQ3Negative1387091 - 138786128007.8
rpir family transcriptional regulatorVN21_07145Q97MK5Negative1389772 - 139061731738.5
cell surface proteinVN21_07150Not AvailableNegative1390621 - 139169440901.6
pts sugar transporter subunit iicVN21_07155Q797S1Negative1391857 - 139321847155.3
n-acetylmuramic acid-6-phosphate etheraseVN21_07160Not AvailableNegative1393240 - 139414532286.3

Displaying genes 1361 – 1370 of 3362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

151 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da

Displaying 1–10 of 151 metabolites

Health Effects

No health effects information available for this bacterium.