Paraclostridium benzoelyticum str. JC272

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptostreptococcaceae

Genus

Paraclostridium

Description

Paraclostridium benzoelyticum str. JC272 is a Gram-positive, rod-shaped bacterium that is characterized by its ability to form spores and thrive under anaerobic conditions. This organism exhibits heterotrophic, organotrophic, and chemotrophic metabolic pathways, allowing it to utilize a variety of organic compounds as energy sources. The optimal growth temperature for this strain is 32.0°C, which suggests a preference for mesophilic environments. As a spore-forming bacterium, Paraclostridium benzoelyticum str. JC272 possesses the capability to endure unfavorable environmental conditions, contributing to its survival and persistence in specific habitats. Its anaerobic requirement indicates that it is adapted to environments devoid of oxygen, which is typical for many members of the Clostridia class. The metabolic versatility of Paraclostridium benzoelyticum str. JC272 may facilitate its role in the degradation of organic matter in anaerobic ecosystems, such as sediments or the gastrointestinal tracts of animals. This adaptability not only underscores its ecological significance but also suggests potential applications in biotechnological processes, such as bioremediation or the production of biofuels from organic waste. Understanding its metabolic pathways could provide insights into its ecological functions and interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptostreptococcaceae
GenusParaclostridium
SpeciesParaclostridium benzoelyticum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceheterotroph; organotroph; chemotroph
PathogenicityNot Available

Genome Summary

Paraclostridium benzoelyticum str. JC272

Accession NumberLBBT00000000.1

Gene Summary

Adenine Count

1282964 bp

Thymine Count

1268371 bp

Guanine Count

507892 bp

Cytosine Count

496730 bp

Genome Length

3555957 bp

Protein-coding Genes

3242 genes

Non-Coding Genes

120 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s ribosomal rnaNot AvailableNot Available+8 - 2923Not Available
5s ribosomal rnaNot AvailableNot Available+18 - 134Not Available
5s ribosomal rnaNot AvailableNot Available+39 - 155Not Available
5s ribosomal rnaNot AvailableNot Available+42 - 158Not Available
iron transporter feoaVN21_00005Not Available+70 - 2887986.93
5s ribosomal rnaNot AvailableNot Available+150 - 266Not Available
5s ribosomal rnaNot AvailableNot Available+207 - 323Not Available
iron transporter feobVN21_00010Q6G6C4+309 - 221370210.0
5s ribosomal rnaNot AvailableNot Available+348 - 464Not Available
5s ribosomal rnaNot AvailableNot Available+463 - 579Not Available

Displaying genes 1 – 10 of 3362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

151 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da

Displaying 1–10 of 151 metabolites