Leclercia sp. LK8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Leclercia

Description

Leclercia sp. LK8 is a microbial strain characterized by having a single replicon. This trait indicates a streamlined genomic structure, which may influence its replication and genetic stability. The strain is cataloged under the accession number LDUO00000000.1, which serves as a unique identifier for its genomic sequence in biological databases. Leclercia species are typically associated with diverse environments, often being isolated from clinical and environmental samples. As part of the Enterobacteriaceae family, Leclercia sp. LK8 may exhibit traits relevant to its ecological niche, including potential pathogenicity or symbiotic relationships with other organisms. However, specific pathogenicity or ecological roles for this strain remain uncharacterized based on the information provided. Understanding the genomic characteristics of Leclercia sp. LK8, especially the presence of a single replicon, could provide insights into its adaptability and resilience in various environments. This trait may also reflect its evolutionary strategies within the microbial community. Research into the ecological roles and interactions of Leclercia species can expand knowledge on their impact in both clinical settings and the broader environment, particularly regarding their potential contributions to microbial diversity and ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusLeclercia
SpeciesLeclercia sp. LK8
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Leclercia sp. LK8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leclercia sp. LK8 75, whole genome shotgun sequence.

Gene Summary

Adenine Count

1160597 bp

Thymine Count

1163274 bp

Guanine Count

1444178 bp

Cytosine Count

1441721 bp

Genome Length

5209770 bp

Protein-coding Genes

4596 genes

Non-Coding Genes

248 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylaminoimidazolecarboxamide formyltransferaseVK95_21470A8AKS0Positive4550989 - 455257857432.5
phosphoribosylamine--glycine ligaseVK95_21475Q8Z334Positive4552594 - 455388645673.5
membrane proteinVK95_21480P32681Negative4553977 - 455466925915.2
dna-binding proteinVK95_21485P0A1R7Negative4554681 - 45549539505.48
hypothetical proteinVK95_21490P32680Negative4555140 - 455573022538.9
endonuclease vVK95_21495B5F1I1Negative4555772 - 455644324807.1
uroporphyrinogen decarboxylaseVK95_21500A4W5C0Negative4556453 - 455751739168.5
nadh pyrophosphataseVK95_21505B7NRS9Negative4557556 - 455832929455.4
anti-rna polymerase sigma 70 factorVK95_21510A4W5B8Positive4558425 - 455891018645.1
thiamine biosynthesis protein thicVK95_21515A8AKS9Positive4559154 - 456104970683.1

Displaying genes 4291 – 4300 of 4844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

308 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da

Displaying 1–10 of 308 metabolites

Health Effects

No health effects information available for this bacterium.