Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone htpg | Lupro_RS04820 | Not Available | Positive | 1081595 - 1083484 | 72345.9 |
| hypothetical protein | Lupro_RS04825 | Not Available | Positive | 1083616 - 1084290 | 25110.8 |
| nudix hydrolase | Lupro_RS04830 | Not Available | Positive | 1084300 - 1084683 | 15054.1 |
| ribbon-helix-helix domain-containing protein | Lupro_RS04835 | Not Available | Positive | 1085224 - 1085463 | 9155.64 |
| type ii toxin-antitoxin system rele/pare family toxin | Lupro_RS04840 | Not Available | Positive | 1085456 - 1085749 | 11526.7 |
| hypothetical protein | Lupro_RS13660 | Not Available | Negative | 1086524 - 1086664 | 5142.52 |
| rlua family pseudouridine synthase | Lupro_RS13120 | Not Available | Positive | 1086720 - 1087334 | 22879.1 |
| s1/p1 nuclease | Lupro_RS04850 | Not Available | Negative | 1087345 - 1088133 | 29973.2 |
| spfh domain-containing protein | Lupro_RS04855 | Not Available | Positive | 1088245 - 1089105 | 32092.3 |
| duf4177 domain-containing protein | Lupro_RS04860 | Not Available | Positive | 1089187 - 1089372 | 7166.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
