Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cata-like o-acetyltransferase | Lupro_RS04580 | Not Available | Negative | 1036483 - 1037109 | 24335.2 |
| rlua family pseudouridine synthase | Lupro_RS04585 | Not Available | Negative | 1037111 - 1038130 | 39149.8 |
| pasta domain-containing protein | Lupro_RS04590 | Not Available | Negative | 1038130 - 1038720 | 22230.5 |
| hypothetical protein | Lupro_RS04595 | Not Available | Positive | 1038958 - 1040385 | 51827.5 |
| d-alanine--d-alanine ligase | Lupro_RS04600 | Not Available | Positive | 1040534 - 1041511 | 36466.8 |
| pantetheine-phosphate adenylyltransferase | Lupro_RS04605 | Not Available | Positive | 1041514 - 1041969 | 17233.9 |
| m14 family zinc carboxypeptidase | Lupro_RS04610 | Not Available | Positive | 1041980 - 1043719 | 66937.2 |
| duf1853 family protein | Lupro_RS04615 | Not Available | Positive | 1043744 - 1044562 | 32653.2 |
| hypothetical protein | Lupro_RS04620 | Not Available | Negative | 1044575 - 1045237 | 25147.4 |
| hypothetical protein | Lupro_RS04625 | Not Available | Negative | 1045365 - 1045667 | 11452.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
