Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional metallophosphatase/5'-nucleotidase | Lupro_RS00395 | Not Available | Negative | 87203 - 88633 | 54017.9 |
| hypothetical protein | Lupro_RS00400 | Not Available | Negative | 88672 - 89112 | 16800.5 |
| membrane protein insertase yidc | Lupro_RS00405 | Not Available | Negative | 89188 - 91092 | 73468.1 |
| ctp synthase | Lupro_RS00410 | Not Available | Negative | 91204 - 92817 | 60268.8 |
| carbohydrate binding family 9 domain-containing protein | Lupro_RS00415 | Not Available | Negative | 92893 - 95064 | 83593.2 |
| sdr family oxidoreductase | Lupro_RS00420 | Not Available | Negative | 95496 - 96377 | 32081.0 |
| 50s ribosomal protein l34 | Lupro_RS00425 | Not Available | Positive | 96568 - 96729 | 6202.74 |
| carbamoyl-phosphate synthase large subunit | Lupro_RS00430 | Not Available | Positive | 96872 - 99721 | 106052.0 |
| hypothetical protein | Lupro_RS00435 | Not Available | Negative | 99784 - 100125 | 12362.0 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | Lupro_RS00440 | Not Available | Positive | 100548 - 104078 | 130090.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
