Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 982606 - 982690 | Not Available |
| 23s rrna pseudouridine(2604) synthase rluf | Lupro_RS04335 | Not Available | Positive | 982780 - 983583 | 30772.6 |
| trna guanosine(34) transglycosylase tgt | Lupro_RS04340 | Not Available | Positive | 983637 - 984767 | 42779.8 |
| lptf/lptg family permease | Lupro_RS04345 | Not Available | Positive | 984771 - 985859 | 41767.4 |
| dmt family transporter | Lupro_RS04350 | Not Available | Positive | 985846 - 986724 | 33074.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | Lupro_RS04355 | Not Available | Positive | 986782 - 987735 | 35969.6 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | Lupro_RS04360 | Not Available | Positive | 987787 - 989337 | 57357.2 |
| tlpa family protein disulfide reductase | Lupro_RS04365 | Not Available | Negative | 989498 - 990520 | 38299.1 |
| tlpa family protein disulfide reductase | Lupro_RS04370 | Not Available | Negative | 990537 - 991910 | 52675.8 |
| histidine ammonia-lyase | Lupro_RS04375 | Not Available | Positive | 992045 - 993553 | 55765.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
