Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c1 family peptidase | Lupro_RS03875 | Not Available | Positive | 877684 - 878841 | 43849.4 |
| dna-binding protein | Lupro_RS03880 | Not Available | Negative | 878899 - 879321 | 15951.7 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | Lupro_RS03885 | Not Available | Negative | 879324 - 880991 | 63479.0 |
| chorismate-binding protein | Lupro_RS03890 | Not Available | Negative | 881067 - 882137 | 41046.6 |
| paai family thioesterase | Lupro_RS03895 | Not Available | Negative | 882163 - 882582 | 15433.9 |
| is1096 element passenger tnpr family protein | Lupro_RS03900 | Not Available | Positive | 882660 - 883151 | 19062.3 |
| hypothetical protein | Lupro_RS03905 | Not Available | Negative | 883177 - 884238 | 41778.0 |
| abc transporter atp-binding protein | Lupro_RS03910 | Not Available | Positive | 884330 - 885229 | 33162.6 |
| abc transporter permease | Lupro_RS03915 | Not Available | Positive | 885231 - 886058 | 31894.2 |
| t9ss type b sorting domain-containing protein | Lupro_RS03920 | Not Available | Positive | 886122 - 890105 | 147126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
