Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS03785 | Not Available | Positive | 857060 - 857479 | 14676.5 |
| hypothetical protein | Lupro_RS03790 | Not Available | Positive | 857495 - 857911 | 15994.1 |
| endonuclease/exonuclease/phosphatase family protein | Lupro_RS13905 | Not Available | Positive | 858138 - 858377 | 8921.85 |
| exodeoxyribonuclease iii | Lupro_RS03795 | Not Available | Positive | 858386 - 858904 | 20076.9 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | Lupro_RS03800 | Not Available | Negative | 859086 - 860678 | 62330.4 |
| methyltransferase domain-containing protein | Lupro_RS03805 | Not Available | Negative | 860678 - 861334 | 25150.8 |
| m14 family metallopeptidase | Lupro_RS03810 | Not Available | Positive | 861466 - 863937 | 93779.0 |
| 30s ribosomal protein s12 methylthiotransferase rimo | Lupro_RS03815 | Not Available | Negative | 864114 - 865424 | 49748.4 |
| amidase family protein | Lupro_RS03820 | Not Available | Negative | 865495 - 867141 | 60700.1 |
| signal recognition particle-docking protein ftsy | Lupro_RS03825 | Not Available | Negative | 867234 - 868187 | 34456.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
